YALI0F20042g

Overview

Description similar to uniprot|P26793 Saccharomyces cerevisiae YKL113c RAD27 ssDNA endonuclease and 5 -3 exonuclease
Locus type CDS
Locus tag YALI0F20042g

Location

Species Yarrowia lipolytica Positions 2675258..2676479
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1222 (nuc.)
Previous locus YALI0F20020g Next locus YALI0F20064r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20042g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20042gYALI0F20042g_mRNA-001YALI0F20042g_CDS-001

Nucleotide sequence

 

>YALI0F20042g
ATGGGTATTAAAGGATTGAACAAATTACTGATGGAACACTGTCCCGCGGCTCTGCGGTCG
TCGGAGATCAAGAACTTTGGAGGTCGAAAAGTCGCCATCGATGCCTCCATGTCTCTCTAT
CAGTTTGTGATTGCAGTACGACAGGCTGATGGCCAACAATTGACCAACGAGAATGGAGAG
ACCACGTCGCATCTCATGGGCATGTTTTATCGAACCCTGAGAATGGTCGATAACGGTATC
AAACCCGTATACGTGTTTGACGGCAAGCCCCCCGTCCTCAAGAGTGGAGAGCTGGCCAAG
CGAAAGGAGCGACGAGAGGAGGCTCTGAAGAAGATTGAGGAGCTCAAACAGCAAGTGGAG
GATGGTGAAGAGGGTGAGGAAACAAAGGAGGCTCAGGAGGATGTTACTCGATTCGAAAAG
CGAACAGTTCGTGTGACACCCGAACAGAATGACGAGGCCAAGAAACTGCTCACACTCATG
GGTATTCCCATTGTGGAGGCTCCATGTGAAGCTGAGGCTCAATGCGCCAAGCTAGCCGAG
GCCGGAAAGGTGTATGCTGCTGCCTCCGAAGATATGGATACTCTGTGTTTCGGTTCTCCT
GTTCTGTTGCGACATTTGACCTTTTCCGAGGCCAAGAAGATGCCTATTTCCGAAATCAAC
TTTGCCAAGATTCTGGAGGGTCTGGAAATGACCCATGCTCAGTTCATTGATCTGTGTATT
CTTCTGGGATGTGATTACGCAGACACCATCAGGGGAGTTGGACCTCAGACCGCTCTCAAG
CTCATGAAGGAACATGGAAGTCTGGAGAAGATTGTAGAGCATATCGAGAAGAATCCCTCT
GGAAAACTCAAGGTGCCCGAGAACTGGCCGTACCAGGAGGTTCGTGCTCTCCTGCAAGCG
CCTGATGTACTCGATTCCAGCAGCTGTGATATCAAGTGGAACAATCCCGATGTCGAGGGA
CTGGTGGACTTCCTGGTGAGAGATAAGGGATTCTCCGAAGATCGAGTTCGAGCAGGAGCT
GCGAGACTCATGAAGCAGGTCAAGGTGAAGCCGCAGGCGCGACTTGATGGCTTTTTCAAG
GTTATGCCCAAGGAGGGAGGAGAGAAGCGAAAGGCGGACGACAAGAAGACTAAGGGTAAG
AAGCCCGCCACTAAGAAGGCAAAGAAGTGATTGGTTAACTATTGGTAAAAGTAAAAGAAA
ATTAATGCATTGAAACACATCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20042g_CDS-001

Protein length: 390 aa.
Product: 5' to 3' exonuclease, 5' flap endonuclease, putative

>YALI0F20042g_CDS-001 MGIKGLNKLLMEHCPAALRSSEIKNFGGRKVAIDASMSLYQFVIAVRQADGQQLTNENGE
TTSHLMGMFYRTLRMVDNGIKPVYVFDGKPPVLKSGELAKRKERREEALKKIEELKQQVE
DGEEGEETKEAQEDVTRFEKRTVRVTPEQNDEAKKLLTLMGIPIVEAPCEAEAQCAKLAE
AGKVYAAASEDMDTLCFGSPVLLRHLTFSEAKKMPISEINFAKILEGLEMTHAQFIDLCI
LLGCDYADTIRGVGPQTALKLMKEHGSLEKIVEHIEKNPSGKLKVPENWPYQEVRALLQA
PDVLDSSSCDIKWNNPDVEGLVDFLVRDKGFSEDRVRAGAARLMKQVKVKPQARLDGFFK
VMPKEGGEKRKADDKKTKGKKPATKKAKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG