YALI0F20020g

Overview

Description some similarities with uniprot|Q873L5 Neurospora crassa B18E6.100, unknown function
Locus type CDS
Locus tag YALI0F20020g

Location

Species Yarrowia lipolytica Positions 2671478..2674839
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3362 (nuc.)
Previous locus YALI0F19998g Next locus YALI0F20042g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20020g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20020gYALI0F20020g_mRNA-001YALI0F20020g_CDS-001

Nucleotide sequence

 

>YALI0F20020g
ATGGACGATCTGGAAAAGGGTCCTATTGACGACCGGCATCCGGCACCCGTCCCCGAAGAC
GAATTCAACGACTCGTCGTCCACACATACAAACCCGCCCCAGCCACCACCCGCGGTTGCT
ATGCCACATGTCTCTCGTCAGACCCAGAACCCCTACCAGCACATGGGCCACGATAACCTC
CACGAGTCTGTGCAACAGGCCGGCACCCACGCCATCCACGGCTACCCGCCTGCTCACCAG
ATCTATCAACAGCCCACTTCTCCCGCATCTATTCAACCCGAGGATGGCTTCCATGTGCAT
CCACTAGCTCATTCGTATCCACTCGACAACGTGGAGAGCTCAAACACATACGCTACGGCT
GCCCAGGTGCCCCGACCACCGCCCATCGACACCTCGATCGCCAACGAAAAGGCTGGTTTG
CTGCAGGCATCAAACAACAGCCACCATTCGACATCTTCCGACGATGAGCCCGAAGAGAAC
CTGCAGCAACGAATCGAACGTATGGCCAACGGCACCGTCCCCGGAGGATCAAAGATGCGA
CGGTCGGCCTCCAAGAACTCGAAGCGTCGAGGTAGCAACTCCAGTAGCGCCACTGGCCTC
TACAGGTCGAAGACCTCTGCCTCTGGTCGAAGTTACAAGAGTCATGCTGGAGAGGAGCAT
CGAGCTACCGGACGACGACGCTCAAACTCCACATCTCAGCAGCCCGGCAGTGCCATGCCG
CCCCAGAGCGCTGTGACAAACAATAATAACTCCATGGACGAGTTTCCTCTTGGTCTTGGT
ATCACCCGCCACCAGACCAACGCCACCACACATACTACCGGAGACCGAACCACTAACGAG
AAGGAAGAAGAGGATGAGAAACACCCAAAGGTGTCGCATGTGCTGGAAACGGTGTTCGAG
GACTCGGATGCCGACTCCACGGACCTCCCCGAAATCAAGGACGTCATGGGCGACATTCGA
GAAGAGCACGGAGTAGAATCTACCGACCACTCTCTACGACCTCCGGAGAACGAGGACAAG
ATTGCCACCGGTGTGCGACGGGGCTACCACGCACTCCAGCGATCCACTGGTACCCAGCGA
CCTACCGAGTTCAAGATCATCGTCAAGACTCGAGCGTACATTCGATACCTCATGCAACTG
TCGATTCTCACTCGATGCTTTGTTTTCTGGTTGCCTCTTGCTGTCGTGTTCTTTATTCCC
CTTGCTATTGGTGCTTGGGGTCAGCCTGATGCTGAACTCGGTAATGTCCGTCTCTCGTGG
ATTTTCATCTGGGTCGAAGTCATGTGGAGCTCCCTCTGGGTGTCTCGCCTGGTTGCTCAT
GTGATTCCCAACTTATTTCGTGTTATTGCGGGCATTATTTCCCCAACTATTAAGCGATTT
ACCACTATTGTCTGTGCCGTGGAACATGCTATTACGCTCGTCTTGTGGGCATTTTGCTCT
TGGATCACCTTCATGCCCGTCACCAGCATGAACAAGTTGGCCAAGCCCAATGACGCTAAA
GAGGTATGGCAGAAGAACTTTTCCAAGGTGCTTGTGTCCTGTCTTATCACAGCCATTGTC
TACCTATGTGAGCGAATTTTCATCCACTTCATCTCCGTGTCCTTCCACAAGACACAGTTT
GCAAACCGAATCAGAGACAACCGTCTTGCCATCTCTGTTTTGGTCAAGATGTTGGACGCC
GCTTACATGGTATTCCCTCAGTTTTGTCCCGAGTTCGAGGATGAGGATGTGACACTTGCT
GGTGGCCTTCTTTTTGCAACTACTCGAAAGATGGATGATAGACTTAACCGACGTATTCAG
CAGGCTGTTCAGAACGAGGGTACCCGGCGGTTCTTTGGAGGACTCAAAAAGGCGTCTAAA
TCCTTGGGTGAAGCTGCCAGAGATGTCATTGGTCGAACTGCAGGCACTGCAGCATCTACC
GAGTCCATTGTCATGGAAGCCATGAAGTCGCGATCCACAGCACGAATTCTCGGTAAACGA
ATCTGGATGTCTCTTGTTCTAGAGGGACAAGACTCTTTGACTGTCCAGGATATCATCGAT
GTGGTTGGAGAACACTCTCGAGACGAGTGTGAGGCTGTGTTTGCCGTTCTCGATCAGGAC
GGCAATGGAGACTTGACTCTCGACGAGATGTCTGCTGCTGTGACCCAGATCTGTCACGAG
CGAAAGTCGATCTACAAGTCTCTCAAGGATGTCGATTGTGCCGTCAAGAAACTGCATCAC
ATTCTTGTGTTTGTGGTTCTGCTGATTTGTATCATCATTTTTGTCGGAATGTTGTCTCCT
TCTGTCGGAGCCGTTTTAGCCACCCTTGGTACCACCCTGCTTGCCTTCTCATTCGTCTTC
TCTACCACCTGTCAGGAGATTCTGTCTTCTTGTGTCTTCCTGTTTGTGAAGCATCCAATT
GATGTCGGAGATCGAGTCGATATTGCGGATGTCGCCTACAACGTTACATCCTTGTCTCTT
CTGTACTCCACCTTCACCCGAACAGATAATGGTAAGTTGTGCCAAGCTCCTAACTCGCTG
CTCAACACTCTGTGGATCGGTAACGTCTCTAGATCGGGTCTCCAGTCTGATCCCCAGACC
CTTATTTTAGGCCTTCCCGAGACTTCCACTGAAGACATTGATGAGCTGCACCGACGAGTT
GATCAGTTTGCTCTGGACAACCCCAAGGACTACAAGCCTAAGCCCTGGTTCCAGGTTTCC
GGTTTCACCGATCTCGACCGAATCTCCATCACCATCAACATCACCCATCGGTCCAACTTT
GCCGACATTCCTCTTTGGGGTTACCGACGAACCAAGTTCCTCAAGTTTGTTGCGCAGTGT
GTCCAGGAGATTCCTCTGTACGTCCCCCGTCGAGAGGACAACTACTCGGATCCGGCCAAC
TCGATGTACCTCAGCTCTCTGCCTCCTGGTATCCCCGGTCTATTGCAGAGCCGAAACGAC
CAGAACAAGTCTCCCAGTGGCGATACTTTCACCGAGCTCTCCTCCGATGGACGGAAAGAC
CGATCCCTGTCCAAGAACTCCACCCGATCTACTCGATCTACTCGATCCGCTAGAGACCGT
CAGATTCACGGCGTCGCTCCTACCTGGAGAACCCGAATTCGACCTGGTCTCCGTGTCATC
GACGAGTCTGAGGATGACGACGATTATGCTGTGGAAAGTGATTCTTCGGAGGATCACGAG
CATACTCTTGAGGAGAAAAATAACACTCATGCCACCGGCGGAGTTCAGGCTCAGACTGAG
GTTCAGAACAGATTCAAAAACTAGCTAGCGTGACCTAGCACATGATTCATCTAGTTTGGG
GTATCAGTTGTATCCCAGCTAGCTTATATATATTAGCATTACATCATTTAGAATATGACT
TG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20020g_CDS-001

Protein length: 1088 aa.
Product: Conserved hypothetical protein

>YALI0F20020g_CDS-001 MDDLEKGPIDDRHPAPVPEDEFNDSSSTHTNPPQPPPAVAMPHVSRQTQNPYQHMGHDNL
HESVQQAGTHAIHGYPPAHQIYQQPTSPASIQPEDGFHVHPLAHSYPLDNVESSNTYATA
AQVPRPPPIDTSIANEKAGLLQASNNSHHSTSSDDEPEENLQQRIERMANGTVPGGSKMR
RSASKNSKRRGSNSSSATGLYRSKTSASGRSYKSHAGEEHRATGRRRSNSTSQQPGSAMP
PQSAVTNNNNSMDEFPLGLGITRHQTNATTHTTGDRTTNEKEEEDEKHPKVSHVLETVFE
DSDADSTDLPEIKDVMGDIREEHGVESTDHSLRPPENEDKIATGVRRGYHALQRSTGTQR
PTEFKIIVKTRAYIRYLMQLSILTRCFVFWLPLAVVFFIPLAIGAWGQPDAELGNVRLSW
IFIWVEVMWSSLWVSRLVAHVIPNLFRVIAGIISPTIKRFTTIVCAVEHAITLVLWAFCS
WITFMPVTSMNKLAKPNDAKEVWQKNFSKVLVSCLITAIVYLCERIFIHFISVSFHKTQF
ANRIRDNRLAISVLVKMLDAAYMVFPQFCPEFEDEDVTLAGGLLFATTRKMDDRLNRRIQ
QAVQNEGTRRFFGGLKKASKSLGEAARDVIGRTAGTAASTESIVMEAMKSRSTARILGKR
IWMSLVLEGQDSLTVQDIIDVVGEHSRDECEAVFAVLDQDGNGDLTLDEMSAAVTQICHE
RKSIYKSLKDVDCAVKKLHHILVFVVLLICIIIFVGMLSPSVGAVLATLGTTLLAFSFVF
STTCQEILSSCVFLFVKHPIDVGDRVDIADVAYNVTSLSLLYSTFTRTDNGKLCQAPNSL
LNTLWIGNVSRSGLQSDPQTLILGLPETSTEDIDELHRRVDQFALDNPKDYKPKPWFQVS
GFTDLDRISITINITHRSNFADIPLWGYRRTKFLKFVAQCVQEIPLYVPRREDNYSDPAN
SMYLSSLPPGIPGLLQSRNDQNKSPSGDTFTELSSDGRKDRSLSKNSTRSTRSTRSARDR
QIHGVAPTWRTRIRPGLRVIDESEDDDDYAVESDSSEDHEHTLEEKNNTHATGGVQAQTE
VQNRFKN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG