YALI0F19624g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F19624g

Location

Species Yarrowia lipolytica Positions 2611230..2613167
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1938 (nuc.)
Previous locus YALI0F19602g Next locus YALI0F19646g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19624g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19624gYALI0F19624g_mRNA-001YALI0F19624g_CDS-001

Nucleotide sequence

 

>YALI0F19624g
ATGTGTGAGTATATATGGGCCAGGACTCTGCATTTCGAGCCACTCAATGCCTCAGCACTA
ACTTGCAATGCTACAAGTGATCCGTACTAACGCAGCTTCGTCAAAACAGGTGAGAACAGA
GAACCACGACCACGGGCGACAATGAGACGACCACATGCGATAAGGACGAACAGGATGGAA
GATACGAACAACACTCGGGGTTAAAGCGACCCAGACTAGGTCTGGACCCTGGGATGCCCT
TTTTCGTGCCCAGAACGGTTGATAGAATATTGGTGAAATGTTCTAGACCCTTCAGATCAG
CCGTGTCATGATTCGAAAGAAGTCATGATCATCAACATGATATCCGCGCACCCAGTCAGT
CAGGTGAAGTCAGGTCGATACTCGCGCCCATTTTACTATTTCACTACTAACATAGCCAAA
AGCCAACGCGCTGAGAAGCCGGATTTCGGCGCCTCCAGGCTCGGCCAGCTCTCCACGGTC
AGCCAAGAGAGTCGCATCAGCTGGAGGAGTGAAAAAAGCTGCAACAGCCAAGCCAACCTC
CACGCGGTCTGCTAATCAGCTTAAGAACAACGCACTCTTTCAGGCCATCAAGGGTATTCC
CAGAACATCTCCGACAGCCCCTGCCCAACCAGCTCAGCCACGACCAGGCCAGGAGTTGAG
AGACCGAATCTCCGGAAAGACGCCCGCAAAGACTCAAGCGCCACCTCCAGCTAAGACAAA
GATCCCAGCCAAGCCCGCACACCCTCTGGCAAGCCGGTTCGGCCAGCCTCCTCTTCCTAA
GTCCAAGTTGGACAAGCTGGGCACAACAACTGCTCCCTCCCACAGCAGATACAACGGCAG
CGACACCAGCCGCTCCTACAGTTCAAGCCATAGCTCATCGAGTGACAACCACAGATCCAC
GCACGACACCTCGGCGTCCTCTACTTCTTCCAGGAGAGACGACAAGCACGTACGAGGCGG
TGGACACGACAAGTATGGCAACTACGACAAGTACGGAAATAACGACAAATTTGGCAGAAG
CCAGGAGAGGTACAACAGTCGAGAAAGAGAGCGGTACGAGCGAACAGGGGGATCGGATAG
AGCCGTCAGTAGCGACAGCAGAGACAGATTTGGAAACGGTGGACGCGGCAACGAAAGCAG
GAATAGATACAACGACCAGCCTCGATCCCAGGCCCAAAGCTACCAAGAGTCTCGGGAAAG
ATACTCTGAAGATCGAGTGCGATACAGAGCCACGTCCCCTCAGAAGCATACTGCTCAGGA
GGCCGTTGCTAGTCCCGCTGCGTACGCCAATCCCGGAGATACTGTTGCCGTTCGACCTGC
TGCTCAGGTGTCTAACACAAATTTCGGTGCAAAGGTACCGGAGCTGTCGGCCAACGGAAC
CCCTTCATACTCAATCAAGCATCTGGCCATGCCTCCCATTGTTCAGATCTCCAATCTGGA
TCGAGGAACCACTCGAGACGATCTGTACAAGTTCTTTGTTGAGCTCGGCGCTATCCGTGA
CTGTCGCATTCTTACTCTGGGTACACAGGGTGCTATGGGTGAGATCACGTTCGAAGACCC
TGAAGCTGCTAAAGTCGCCTTCGCAAAGTTCAATGGCGCACTAGCCGATGGACGACGACT
CGTCGTCAACATTGTCAAATACAACTCCATCGCCGACCAGAAGCCCGTGGAGGTTAACAA
CGCTGTGCACCACTGGCCTGGAGCTGGTAATCTTCGATCCGACGGCTATCTGAACAAGTA
GGAGGTTATGTGCGAGTATTTGAACAGAGGATGTATGGATGAGAGGAGGGGAGAGGGGAA
ATTTGAGTACGCTGGAGACGACAGGGCCTCACAAGTGGAGGCCTTGGGATTCGTTCGACG
TGATGCTCTGGAAAATGGTGGTGTAGATTGGGTGATCTACATTTACGGTTATATTGTATA
ATGCATGTTTGTATAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19624g_CDS-001

Protein length: 448 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F19624g_CDS-001 MSSSKQPKANALRSRISAPPGSASSPRSAKRVASAGGVKKAATAKPTSTRSANQLKNNAL
FQAIKGIPRTSPTAPAQPAQPRPGQELRDRISGKTPAKTQAPPPAKTKIPAKPAHPLASR
FGQPPLPKSKLDKLGTTTAPSHSRYNGSDTSRSYSSSHSSSSDNHRSTHDTSASSTSSRR
DDKHVRGGGHDKYGNYDKYGNNDKFGRSQERYNSRERERYERTGGSDRAVSSDSRDRFGN
GGRGNESRNRYNDQPRSQAQSYQESRERYSEDRVRYRATSPQKHTAQEAVASPAAYANPG
DTVAVRPAAQVSNTNFGAKVPELSANGTPSYSIKHLAMPPIVQISNLDRGTTRDDLYKFF
VELGAIRDCRILTLGTQGAMGEITFEDPEAAKVAFAKFNGALADGRRLVVNIVKYNSIAD
QKPVEVNNAVHHWPGAGNLRSDGYLNK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG