YALI0F19536g

Overview

Description weakly similar to uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1
Locus type CDS
Locus tag YALI0F19536g

Location

Species Yarrowia lipolytica Positions 2602498..2603949
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1452 (nuc.)
Previous locus YALI0F19514g Next locus YALI0F19558g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19536g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19536gYALI0F19536g_mRNA-001YALI0F19536g_CDS-001

Nucleotide sequence

 

>YALI0F19536g
ATGTCCGAGAAACAACTCTCAATCTCAAGTGCCGATATCGTTCAGGTGCATTCGCACACG
CACACGCACTTGACACCTGAAGAGAAGAGTCAAGAGAAGAGAATTGTGCGAAAAATCGAT
CTTTGGTTGCTGCCAATTCTCTCTCTTCTCTACCTGCTATCATTTTTGGACCGTTCTAAT
GCCGGAAATGCTCGTCTAGAAGGACTAAACGATGCTATAAATCTGTCTGATGCAGACTAC
CTCACCTCTCTATCTCTCTACTTTGTGGGATACATTCTGTGTGAAGTTCCTAGTAACATC
ATTCTCAAGAGAACGACTCCTCGAATCTGGTTGCCTACGGTCATGTTGCTTTGGGGGGTC
ACTTCTACTCTCACTGGAGTGGTCTCCAACTCCTCGGGGTTTCTAGCCAATCGGTTCTTT
CTAGGTGTTACAGAGGCAGGTCTGTTCCCTGGTGTTCTCTTTTACTTCTCCATGTGGTAT
CAGCGGAACGAGATTCATTACCGTGTGGCTCTCTTTTTCGCATGTGCGGCCCTGGCCGGA
GCTTTCGGGGGTCTCCTGGCCTACGGAATTGGCTTCATGAAAGGCATTGCAGGACTAGGA
GGCTGGGCATGGATCTTTATAATCGAAGGTCTCGTCACAGTCGTCGTGGCCATTGCTGCC
TACTTTCTCATCTTCAACTATCCCTCTACAGCTCGATTCTTGAGTGAAGAAGAACGAGAG
ATTGTCAAGAAGAGACTAGAAATGGACGGAGATGCAGCCAATGAAGAGTCCTTTGAATGG
AAATGGGTATGGAGAGCATTCACCGATGTTAGAGTGTGGCTATATGCTATTTCTTTCCAC
GCCCTAGCTCTTCCTCTATACACTTTGTCCATGTTCCTACCTTCCATCATCAACAACTTT
GGCTACTCAACCACTGTTTCCCAGCTTCTGACGGTTCCTGTTTACGCCGCTGCAACTATC
ACTACTCTGGCTGCGGCTCTATTGGCAGAAAGAACCCGAAACAGATGTTTGTATATCATT
GCCGGCAGTGTTGTTGCTCTGATTGGATACATCCTCCTACTAACCACCCATACCCCTGGT
GCCAAGTACGTGGGTGTCTGTTTCGCAGCTGCTGGCATCTATCCAGCTTTGGGAACTCTC
CTCTCGTGGCCCAGTATTAATGTTTCTGGTCAAACGAAACGTTCTGTGGCAGCTGCTATC
CAGATCATGATCGGAGACATTGCACCCATCTATGGTGTTCAAATATACAGAAGCAACACA
GCACCCAGATACATACCTGGGCATGCCACAGCTCTGGGATTTGTCGCAGCTGAGATTGTT
ATCACCGGTATTCTTTGGTGGGTGCTCACTAAAGAGAATCGAAGACGGGATGAGCTGCAA
AAGCAGGGTGTAGTCTCCGAACACGACGAGTGGATGGGTGACGAAGAGTTGTCGTACAGA
TACGAGACTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19536g_CDS-001

Protein length: 484 aa.
Product: Conserved hypothetical protein

>YALI0F19536g_CDS-001 MSEKQLSISSADIVQVHSHTHTHLTPEEKSQEKRIVRKIDLWLLPILSLLYLLSFLDRSN
AGNARLEGLNDAINLSDADYLTSLSLYFVGYILCEVPSNIILKRTTPRIWLPTVMLLWGV
TSTLTGVVSNSSGFLANRFFLGVTEAGLFPGVLFYFSMWYQRNEIHYRVALFFACAALAG
AFGGLLAYGIGFMKGIAGLGGWAWIFIIEGLVTVVVAIAAYFLIFNYPSTARFLSEEERE
IVKKRLEMDGDAANEESFEWKWVWRAFTDVRVWLYAISFHALALPLYTLSMFLPSIINNF
GYSTTVSQLLTVPVYAAATITTLAAALLAERTRNRCLYIIAGSVVALIGYILLLTTHTPG
AKYVGVCFAAAGIYPALGTLLSWPSINVSGQTKRSVAAAIQIMIGDIAPIYGVQIYRSNT
APRYIPGHATALGFVAAEIVITGILWWVLTKENRRRDELQKQGVVSEHDEWMGDEELSYR
YET*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG