YALI0F19261g

Overview

Description some similarities with uniprot|O42826 Schizosaccharomyces pombe Protein pdh1
Locus type CDS
Locus tag YALI0F19261g

Location

Species Yarrowia lipolytica Positions 2571796..2572627
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 832 (nuc.)
Previous locus YALI0F19250g Next locus YALI0F19272g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19261g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19261gYALI0F19261g_mRNA-001YALI0F19261g_CDS-001

Nucleotide sequence

 

>YALI0F19261g
ATGTTAGTTGTTGTTTCCTCATTTTTTTTGTTCCTCTGTTTCAATATTTTTATCTTCCTT
ATTTGCTGTTTTTCACTGACAATTATTTTGTCTAAAACCCTTGACGAGTCCCTTACTCTA
ACCACAACTATTGTACTCCAGTATGTACAGCATGTAAGAGTCCAAATTAGCTTCAGCCAC
CATCATCAATCTCATCGACAACATCACACAACATGGGAGGGTGAGTGAAATCGGTTATTG
AAGAGGAAGACTTGTCAAAGTAAAAGGGACTATTTATGGACGACAACTAACGCAGCTGGA
CTGTTATCATTGTATTGGCACTTGTCGTGGGTCTTTGTTTTGGTGCCTGGGTGTTCGCAC
CTAAGGGCGACAATCAGACGTGAGTATGATGGAAGGTTGCGGATGTGATGGAGGCTTGAG
CGAAAATGGCTTGCTGGATTTGCCACGTCTCTTGAACGACGTCGTGATGGCTGCTGGTCA
GCTTGTGCTGGTATGAGACATGTGCATGATCACATGTTGCACACTACCACGAACTGAGGC
ATATGGACAGGGCCAATTACTCTACTTGTACGACATTTGGCAGCAGATGGTGTTTGAACT
GCTCATGATAATGGAACAGTTCACATTACTTATCAAGGGAACAGTACTAACAACAGCGTC
TGGAGATCATCGTTGATCCTTGCCATGGCCATGATGTACCTAATGTGGGCAATCACATAC
CTCGCCCAACTACACCCTCTAGTGCGACCTACTCGAAGCGACTTGCGACCCGAGTTTGCC
GAGCACGAATAATTTTCTAACATATAATCATTAAAATGTCTACAGTTTATGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19261g_CDS-001

Protein length: 108 aa.
Product: Conserved hypothetical protein

>YALI0F19261g_CDS-001 MLVVVSSFFLFLCFNIFIFLICCFSLTIILSKTLDESLTLTTTIVLQYVQHVRVQISFSH
HHQSHRQHHTTWEAGLLSLYWHLSWVFVLVPGCSHLRATIRPSGDHR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG