YALI0F19096g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F19096g

Location

Species Yarrowia lipolytica Positions 2555349..2558104
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2756 (nuc.)
Previous locus YALI0F19074g Next locus YALI0F19118g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19096g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19096gYALI0F19096g_mRNA-001YALI0F19096g_CDS-001

Nucleotide sequence

 

>YALI0F19096g
ATGTCTCACGGAGCTGGAGGGTACATCAATGGCGTGGTTTCCGACAACAAGACCCCGTCG
CCGTCACAGCCTCCAGTTCATGTCCCCAAGCGAAAGCCGGTCCATCGAAAACCTGTGGGA
GTGGACTCGAATTCCACCACTCCAAGTGCCAGCCCGAACCCTCAGACAGGCTCACCTCTG
CTGGGACCTCCAATCATACCTTATGGAGCTGCGAGTGCCACGGGCACGCCGTCTGCTGCT
CCGGGGACGCCTCCTGCAGCCGCCAAAAAGCAATACCGGTATTCTTCTCTGCTTGATCCA
GAGCCGACCTCTCCGAAACCCGCGACCTCGGAACGCCGGGCCGTAAGCGAGGCCCGAAAA
GTGCCTCCACTTCAAACGACATCTGCTGGCGGATTATCTGGAGCAATCAACTTTTCCAAA
CCCGTGTCACCGGCAAGCCAACATGCACAACAGGGCGTGGGGTTTGGTAGAGCACAGGCC
TCACAGTCGTCTACGGCCCAACCACCGCCGTCGCTGCCACCAAAGGTCCCCGTAACATCA
ACCCACAACCCCTACTCGGGGACTCCGGAGCTGAAACAGGCGTCGTTTGGTTATCAGGCC
AGTCAGTTTGCAAGCCCAGCTGCCGCTCCTTATGCTACTAACGGAACGTCACCAAAACAG
CATGACTCGACCAGCCGCAACTACAGCGCTTCTTCTCGACCACCGGTGCCCAACACGTCT
TATTCGACACCAGTAGCACCTTCGACACCTAAGAATAATGGACCTGGCGGAAATGTACCT
GGGGGAAGTGCCCATGGAAGCACGTCCGCAAGCTCGCAACAGAGCCCTCCCTACCCAGTC
CCCGCAAACACGTCGTCATACGGATCAGCATCGAATACGACACGACAACCCTCGGCCGCC
TCGACCACAACCTCTTCCAACAAGTCTACCCTGCCATACCCAGTTCCTACTCCTGCTGCA
ACAAAACCCACGCCGCAAACTCCTCCCGTTCAGAGTGCGTACAAGTTTGATAGCCCTCAA
GTCGAGGTCAAGCCCGTGGCCAAACCAGCAGTGTCTAAACCGGCTATGCCACCTATTCCC
AAAACTACCATTAACACGTGCCCCCCTGCCATGCCTCCTGTTCCCAAGACCAACATTCAA
AAGCCAATACCCACACCTGCACCAGTAGCTCCTGCTGTCACAAAGGCACCTGTACCAGCC
CCTGCTTCTGCGCCCACTCCTGCTGCTGCACCCATCTACCAGCCGTCACACCATCTGCCT
CCTCGGTCTCCTTCCCCGGACTCGGACTACCAGCACTCGCCTCCCCGACGAACGCTGCGA
GTCGTGAACGACTTTTCTTCTTCTAGTGACGAAGATGAACCCACACCGGCAAAAGCTGCT
CCCCCTGTGCCTACGGTCACCAAGACCCCCGCTGGACCTCGAGAGTACCCTCTGACGAAC
CGCATGTCTCACCTGGAGATCAATGATGGCAACCATCTGGACCCTTTTACACCAGCAGCG
CCTCTGAGAATCCACAAGAAGAGCAATTCGTCGACTTCCAACCCGTCGTTCGACTTTGCA
ACCCGTGAGTCGTTTTACGCCACGCCTTCTGGCTCTACAGATGACATTTCCCAGGAGTAC
GTGACCAACGAGTCGTACCTTAATAGTCAGAGAGGAGGCGTTGATAACAACAACAGATCT
ATGAGTTCCATGTTTACCGGCAACCATAGCTACGACAGCGGGAGCAGTCATAGCACACGT
CCCATGAGCGGAGAGGATCTGCTAGCGGGACATCATCTGCAACCTCAGTACACACACGAA
TCAGCGATTGATCCCTTTGATCCTTCGTTTGATCCTCACAACCCAGCATACGAGCCTAGA
ACTTCTTACGAGCATCCCGAACCTCCTTCACCCCAAACCCCTGCGATCCCTGAAGGGGTT
GCTTTCGACGGATCTGCATTTGGAGGAGGAGCTGTCATTGGTGGTTCTGTTGCTCCCGTT
CTCTTGGATCCCTCAATTAATATCCCAGATCCTACAGAGTATGGTGCTTTTGATGTGGGC
GCTCCATTGGTACCTTCAGTCACCAATATGAGTACTGGAACCGCCACAAGCATGCCAGGA
TTACGGGGCGCACCGAGCATCATCTCGACCACTTCCCAGGTGTCTCAAAAGGGCAGAATT
TCCAACTCCGACTATCCTGCTTTGGGTGTCGAGTCTCAGTATGTCCGTGCGTTGAGAAAA
CGAACAGCCTCAGCATGGTGTGAAGTGCCCTCCAAGGTCTGGGGTCTTCCCCTGGGTATC
TCGGACAAGGCTGGAAAGAAGTTCAACAAGAACATGGACATGCGATATGCAGCTGGCCTC
AAGAGGACCATGGACATTCGTCACTCCCACTTGAAGCCCAGGTTGCTGGCTTCGGAGGTT
GACGATGACGACGGAAAGAGAAGCAGCAGTCACACGGACATGCCATCGTCCATGCATGCT
CCCTCTATCCATTCCATGTCGCGATTCGATAACCGGTCCATCATCTCTCACGACGATGAT
GTTGACGGTAGAAGCAGTGTTTCTTTGGTTTCAGCACCTCAAGAAAGCACGCCACCTCCT
GCAGTTCCAGCTTCACGAGGACGAGCCGCGTCTGATTCGTCTCAGGAGAGTGTCCAGGAG
GTACGACGGATTCACCTATTTGTTGCCAATCCTGATAGCGACTGAAGTTGAAGCTAACGT
AAGCGCATGCCCTCGGAAGTGTATATATTATATCAATGCATTAATTATCAACAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19096g_CDS-001

Protein length: 895 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F19096g_CDS-001 MSHGAGGYINGVVSDNKTPSPSQPPVHVPKRKPVHRKPVGVDSNSTTPSASPNPQTGSPL
LGPPIIPYGAASATGTPSAAPGTPPAAAKKQYRYSSLLDPEPTSPKPATSERRAVSEARK
VPPLQTTSAGGLSGAINFSKPVSPASQHAQQGVGFGRAQASQSSTAQPPPSLPPKVPVTS
THNPYSGTPELKQASFGYQASQFASPAAAPYATNGTSPKQHDSTSRNYSASSRPPVPNTS
YSTPVAPSTPKNNGPGGNVPGGSAHGSTSASSQQSPPYPVPANTSSYGSASNTTRQPSAA
STTTSSNKSTLPYPVPTPAATKPTPQTPPVQSAYKFDSPQVEVKPVAKPAVSKPAMPPIP
KTTINTCPPAMPPVPKTNIQKPIPTPAPVAPAVTKAPVPAPASAPTPAAAPIYQPSHHLP
PRSPSPDSDYQHSPPRRTLRVVNDFSSSSDEDEPTPAKAAPPVPTVTKTPAGPREYPLTN
RMSHLEINDGNHLDPFTPAAPLRIHKKSNSSTSNPSFDFATRESFYATPSGSTDDISQEY
VTNESYLNSQRGGVDNNNRSMSSMFTGNHSYDSGSSHSTRPMSGEDLLAGHHLQPQYTHE
SAIDPFDPSFDPHNPAYEPRTSYEHPEPPSPQTPAIPEGVAFDGSAFGGGAVIGGSVAPV
LLDPSINIPDPTEYGAFDVGAPLVPSVTNMSTGTATSMPGLRGAPSIISTTSQVSQKGRI
SNSDYPALGVESQYVRALRKRTASAWCEVPSKVWGLPLGISDKAGKKFNKNMDMRYAAGL
KRTMDIRHSHLKPRLLASEVDDDDGKRSSSHTDMPSSMHAPSIHSMSRFDNRSIISHDDD
VDGRSSVSLVSAPQESTPPPAVPASRGRAASDSSQESVQEVRRIHLFVANPDSD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG