YALI0F18898g

Overview

Description similar to uniprot|H8X9J4 Candida orthopsilosis Het1 sphingolipid transfer protein
Locus type CDS
Locus tag YALI0F18898g

Location

Species Yarrowia lipolytica Positions 2523444..2524461
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1018 (nuc.)
Previous locus YALI0F18876g Next locus YALI0F18920g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18898g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18898gYALI0F18898g_mRNA-001YALI0F18898g_CDS-001

Nucleotide sequence

 

>YALI0F18898g
TCCTCGCCTCGCGCACATCTTAGCATTAGTCGACTACAGTACTTCTAAAACATCAACCAT
GGCTACCTTTTTCGAGAAGAACAAGAAGAACTTCCAGGACGTGACCATCGTCGAGGGCAA
GGTCGACACCTCCCAGTTCCTGGATGCTTCCAAGGACCTTGTCGGACTTTTCGGTGAGTG
TTCTGAGCCGTGACCAAGGGCGCAATGGCGTGAAAGGAGACACGTGACAGAAGGACGGTC
CATCTTAGTCGACCTGTTTGCTAGATGCCTCGAGAAAGGTCCACCGTCACAGTCAACGCG
TGACAAACAACGCCCATATTGAGATCACGCGATCTGACACCCTAGCAACATCAGCGGTAT
CATAGCGACTGCAGCAACTGTGGGGCACCAACAACCGTTAGAACAAAAGCAGGCCGCTTG
TCATGACCACGGAACTGCAACGATAACCCGATGCAGTCACTGCCCAGATCAAACTAACAC
AGACCTATTCGGATCTACTGCCTTTGGCGTTGTTCAGTCCGACATGAACGGTAACATCAA
GAAGATCCAGGATCGTCTCATGACTAACCCCATCCAAAACGGTACTCTCCAGGATCTCGT
TCTTGCCGAGAAGGGTGAGAAGACCAAGACCGCTACCCAGGGTCTGCTGTGGCTGATGCG
AGGCCTCGAGTTCACCGCTGTGGGTCTGAGACGACAGATCGACAACAAGGACGAGGAGCT
GGCCAAGTCCTTCACCGAGGCTTACAACGCCACCCTCACCAAGCACCACTCCATGCTAGT
GCGACCCATCTTCAAGCTCGCCATGAAGTCTTGCCCCTACCGAAAGGACCTGTTCGAGAA
GCTCGGTCAGGACCAGACTCTTGTCTGGGAGCAGTTTGTTGCCTGGGTTGAGGGTCTCGA
GAAGATTGTTGATATCATCAAGGCCTTCTACCTCGAGGGTAACTACGGTAAGGGTTTGTA
AGTTATTTATCCATCGGATAAGGACATAGTAAAATAGATAATTGTTTTTACATACTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18898g_CDS-001

Protein length: 198 aa.
Product: Sphingolipid transfer protein, putative

>YALI0F18898g_CDS-001 MATFFEKNKKNFQDVTIVEGKVDTSQFLDASKDLVGLFDLFGSTAFGVVQSDMNGNIKKI
QDRLMTNPIQNGTLQDLVLAEKGEKTKTATQGLLWLMRGLEFTAVGLRRQIDNKDEELAK
SFTEAYNATLTKHHSMLVRPIFKLAMKSCPYRKDLFEKLGQDQTLVWEQFVAWVEGLEKI
VDIIKAFYLEGNYGKGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG