YALI0F18876g

Overview

Description some similarities with uniprot|Q7SCR8 Neurospora crassa NCU09365.1
Locus type CDS
Locus tag YALI0F18876g

Location

Species Yarrowia lipolytica Positions 2521277..2523379
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2103 (nuc.)
Previous locus YALI0F18854g Next locus YALI0F18898g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18876g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18876gYALI0F18876g_mRNA-001YALI0F18876g_CDS-001

Nucleotide sequence

 

>YALI0F18876g
GGAAACATAAAGCCAAAAGGCAAATCCCAACTGTCGCAGATTGTGACGACCCAAAAATAC
GGAGAACGCAGTAACAGCTTCCTTATCCTCTAAACCTACTTGGCAGCCCACAACACACCT
TCTGCTTCCATTCCACCTACGGTACTTTAGCAGCCCCCTCTCCATCTTACCTAGACAGCA
GATCGCACGATCTGATCTGCTGTACTCGCCCGAAACATCCCCATCTTCTTGGTGAGTATC
TCTACCCCACAATGGCGCTGGTCTGGCGATACGAGTCATGGCGAAACAAACACGACGCTA
TTTTCTAGTTAGCCCGGTCTCTCCACCACAATATGGCGATGTCCCCAAACGCGGTGGACG
AGGAGCAGACGCCCACACGGCCCGAGGCTGGTGGTGGACGGCATCGTGGGTGGCGGCACA
ATAACCGTCATGGTGGGTTACACTCTCCCACAAGGCGCGCAGGTCCCCCCGCGTCGGTCT
CAATTGCATGGCCGGTGCCCACTCGCAACTCGTCATACCGCTTCTAGACCTGTCACTGTC
ATCTCAGACACGTCACTGGCGCTGTCACTGTCGCTGTCATTCGATTGTTGCATATCAAGA
CAAGAAAACCGCACTCTTCGCGCAGCTCAACTAACTCAGGCCAATGACCTAACATTTTCC
CTCCATCTCTCTCCCCCTCCCCCCATTCCCCCATCCTATCTTCCCCATCCTATCTTCCCC
CATCATTCCACCTATTATTTCCACCCCCTCCATCAACCCTCCCCCTTCACCCTCACACCT
ACCCTTCTGCTTTTAACAGCCCCATCATCCATCCCATTCATCTCTCTTTGCCTCCGAAAC
GAGCCCCATCAGTAAATGTCTGCGCCAAACCCCAATTCCTATAACGACTTTGACGAGTTC
CGGGATCAGTACCAACAGCAGGCAATACCCTCCGAGCTGCCTAGTCAGCCCATGCCGCCT
CTAGCGACCTACGACCAACAACAGCCGCACCTACCTATCGTATACCCGGTGCCGGTCCCC
ATCTGCTCGTACTACCCTCCTGTTGCGTCCTATACCCAGCCGAAACCCAAGCGGAAACGT
AAGCCGTCAAACCCCAATGCCCCATTGAGTCAGCCACCCACGGCACGACCCAAGCCCCGA
CAGTCTGCGTACGCCTTATGGGTCGGCAACATTCCGTCAAACTCACCCATTGACTCGCTG
CGGACACTTTTTGCAACCAAAGACATTGAGAGTATTTTTATGATTCCCCGAAGCCGATGT
GCGTTTGTCAATTATAAGTCTGAAGAAGGTGTTGTCGCTGGAATTGAAGCTTTCAACCAA
AGAGGAGGACAGATCAGATCCAACAAACTAGTAGTAAAGAGACGGACCAAGGACCCCGAC
ACGGATAGCCCCGAGCCATTGACGGACTCGGAGCGGTCCCAGACCTCTTCTCCACCCCTC
ACAGACAGGTACTTTGTCTGCAAGAGTCTCACGGTCAGAGACTTGGAGGTGTCGCGAGAA
AACTCGCTGTGGTCGACCCAGAGCCATAATGAGGCCATGCTCAATAAGGCCTTCCGAGAC
GGGTCCAACGTCTATTTGATTTTCTCTGCCAACCGAACAGGTGAGTTCTTTGGCTGTGCC
AAGATGATTGAGCCCATCCCTCCTAAGGAGAAAACAATTTCAAGCGTCATCACCACCTCC
TCCAGCCATGTATACAGTCCTGTGATCACCATGACGCCCTCTTCCGGCGAGATTCCCGCA
GGAAGAATTGTTCACGATGTCGAGCGGGCGTCTCTGTTTTGGGAGGTTTTAGATTCTGTG
TCTAAACCCGTAGAAGAGGAGTCCAACTGGACTTCGCCCTTCCGAATCCAATGGCTGGGC
AACCGGAACCGGCGTGTACATTTCTCTGAAACGCGCCACCTCAGAAACTCGCTAAACTCT
GGCCGAGAGGTCAAGGTGGCTCGAGATGGCACTGAGATTGAGCCCTCGGTTGGACGTACC
ATAGTGGAGATGTTCAATTGAGTGGCCTGATTGATGGTCTTGCGTTGAGGACTATCAAAA
AGTAAAAAAACATCCCCCAAGTGATATAAAAAGTAAAAAAACATTGATAAACACAAGAAG
CGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18876g_CDS-001

Protein length: 382 aa.
Product: Conserved hypothetical protein

>YALI0F18876g_CDS-001 MSAPNPNSYNDFDEFRDQYQQQAIPSELPSQPMPPLATYDQQQPHLPIVYPVPVPICSYY
PPVASYTQPKPKRKRKPSNPNAPLSQPPTARPKPRQSAYALWVGNIPSNSPIDSLRTLFA
TKDIESIFMIPRSRCAFVNYKSEEGVVAGIEAFNQRGGQIRSNKLVVKRRTKDPDTDSPE
PLTDSERSQTSSPPLTDRYFVCKSLTVRDLEVSRENSLWSTQSHNEAMLNKAFRDGSNVY
LIFSANRTGEFFGCAKMIEPIPPKEKTISSVITTSSSHVYSPVITMTPSSGEIPAGRIVH
DVERASLFWEVLDSVSKPVEEESNWTSPFRIQWLGNRNRRVHFSETRHLRNSLNSGREVK
VARDGTEIEPSVGRTIVEMFN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG