YALI0F18656g

Overview

Description weakly similar to uniprot|O13912 Schizosaccharomyces pombe Hypothetical protein C23C11.06c
Locus type CDS
Locus tag YALI0F18656g

Location

Species Yarrowia lipolytica Positions 2490388..2492084
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1697 (nuc.)
Previous locus YALI0F18634g Next locus YALI0F18678g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18656g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18656gYALI0F18656g_mRNA-001YALI0F18656g_CDS-001

Nucleotide sequence

 

>YALI0F18656g
ATGGCTCTCAACGAAGTACCCCCGGAGCCCACCAACCCCTCGCCAGAGGAAGAGAGAATG
ACCCCCAATGAGAGAACCCAATTGCTGACACCAGAAGACCCCCAGGTGACCCCATACAAC
TTGCTGAGTGTGCGTATTGCCCGGTCGTTCATCACCGTCTTCTTCGCTATCTCGGTGATT
GCATTCCTTCTGCTGACCCTCAATCTGTTTGTACACGTACCCAGTCTGTACACCAGAGGA
GGAGGTTTCCTGTCGTGGTTCTTTTCGCTCATTGCAGTGACCACCACTGTCAACTCGGCG
CTTTTCTTCTCCACCCCCTCGGTCATGGAGAGACAGATCCAATACGCCACCATCTTCTTG
CTGTTTATCGATCTAATCATTCTGGTTGCCACCCCGCAACTGCGATATGGAGAAGTCATT
GCTGGCCTCATCATCCCCGTCTGGGCCATTCTGACCTGCTCTCTGTCAGCCGTCTCAGAC
CTGATCGTGCAGTGGGGCAAGAGCACCGAGGAACGACGTCTCACCGGCCGTGTGGAGACT
CGAAGAACCCTCGGAGAGTGGCTCAAGGTATCTGTCAATCTGCTTTTCAACCTTGTCAAC
CTGCTTCTGCTCATCGCCGTAACTCTCTCCATTACTCTGTTTGCCATTGATGCTGCCCGT
GTGCCTGTGCCTGGAAAGCGAGTCGATGTTGACCATGCCGCCTTCAAGGTCCATATCAAT
TGCTATGACCTGCCCGGTAACCACCTGCTCCAGCTCCAGGATACCCATCCTCACGTTGCT
TCCAGACGACCCGATCGACCCGATCCGTCCAAAAAGAACGTTACCATCTTCGCTGAGGCA
GGATCCACTTCCTCCGAGGTCTACTGGAGTTGGATCACTGACCTCTACGCCATGAACGAG
ATCCCCCGAGTTTGCACTTGGGATAGACCCGGAGTTGCCTTCTCCGACGCCAGCCGAGGT
CTCACTTCCGCAGGGGACATTTCTGACCTCCTCAGCGAGGCTCTCACCTCTTTCTTCTCT
TCAGAGGAAGAAGGTGGCCAGACCGAGCTTCCTAACCTGCTCATCGTCGCCCACGGAATC
GGAGGTCTCTACTCTCGTGTGTTTGCCTCCAAGCACATTTCCATCGTCAAGGGAATGATC
CTTATTGATACCCTCCACGAAGACCTAATTTCAGATACTCTCACCCTGTGGAGAGGTATC
AAGCTCTTTATTGAAGGAGCCATCTCTCCTCTCGGCCTCCAGTCTCTCTGGTCTCTTCTA
AAGGGCCATGGCTCTTGGGACCGACTTGTGGGCCCCGACATGGTCTACACTACCAAGTAC
CTTGGCTACCAGCTCAAGGAGAACGCTGTTGCCTGGGTTACTCGATCCGAAGTGCGAGCC
TCCAACGCCGTGCTCGTCAACCTGGACATCCCTGTCGAGATCGTCTCCTCTTCCCAGATG
ATCAAAAAGTCTAAGAAGTGGAGCGCCAAGCAGCGAGAACTCACTCGTCTGACCAAGGAA
AACGTTGGCTGGAAGATCCTCGAGGGTGGCCACGATCTGTGGAAGGAGGGCAAGACCAAG
AAGGAGCTCCAGGATATCCTCCGTGACTTCGTCGATTACTACATTTGATCGCTATAATCG
TCACGTCAATCATTTAACCACCCCTGTATATCTATAGCTAATGACTATTACAAGAAATAA
ACTAGAAATATGTACTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18656g_CDS-001

Protein length: 536 aa.
Product: Conserved hypothetical protein

>YALI0F18656g_CDS-001 MALNEVPPEPTNPSPEEERMTPNERTQLLTPEDPQVTPYNLLSVRIARSFITVFFAISVI
AFLLLTLNLFVHVPSLYTRGGGFLSWFFSLIAVTTTVNSALFFSTPSVMERQIQYATIFL
LFIDLIILVATPQLRYGEVIAGLIIPVWAILTCSLSAVSDLIVQWGKSTEERRLTGRVET
RRTLGEWLKVSVNLLFNLVNLLLLIAVTLSITLFAIDAARVPVPGKRVDVDHAAFKVHIN
CYDLPGNHLLQLQDTHPHVASRRPDRPDPSKKNVTIFAEAGSTSSEVYWSWITDLYAMNE
IPRVCTWDRPGVAFSDASRGLTSAGDISDLLSEALTSFFSSEEEGGQTELPNLLIVAHGI
GGLYSRVFASKHISIVKGMILIDTLHEDLISDTLTLWRGIKLFIEGAISPLGLQSLWSLL
KGHGSWDRLVGPDMVYTTKYLGYQLKENAVAWVTRSEVRASNAVLVNLDIPVEIVSSSQM
IKKSKKWSAKQRELTRLTKENVGWKILEGGHDLWKEGKTKKELQDILRDFVDYYI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG