YALI0F18634g

Overview

Description some similarities with uniprot|G3B7W3 Candida tenuis SMAD/FHA domain-containing protein
Locus type CDS
Locus tag YALI0F18634g

Location

Species Yarrowia lipolytica Positions 2487764..2490318
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2555 (nuc.)
Previous locus YALI0F18612g Next locus YALI0F18656g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18634g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18634gYALI0F18634g_mRNA-001YALI0F18634g_CDS-001

Nucleotide sequence

 

>YALI0F18634g
AAACACGGAGGCAAAAAAAAGGTGAGTATGGAGCACTGGGCGCACGGGTGGAGCTGGCGC
GCTAGGGCCTGTGGACGTCGTGTTTGTCGTCGCGGAGCCCCAGCATATTCTCTGGGTTAT
TCCGGTCTCCGGTTTTCCGGCGTTTCTCTCTCTGCTGCGCCGTCACTGGACCCTCTGGTC
ATCTTCAGAGGTCGGAGATGGCGAGGGGACCTTGGGGCTGCGGGAGTGGATGTGTGGAGG
GACGGTCGACAGGTATTTATACAGACAAGCGCTGTATTGTGAAGTTTGGGGTTGAGATGA
GCTGTGCCAAACGACTCATCAACTGGTTGTTTTGTTGTTTACGTCGGCTTTTGGGGGCCT
GCTTGCGGCCGATTTGGCCACTAAACCCATGTCGTTGGACAACAAAACTGAATCACAGGA
CCATTTTGTCCTCCCATAGCTTTCTGCTCTTCCTCCTCTTCTCTCGAACACCTCTGTCAT
CTCATATTCCCTGCCCACAGTCCACCCTACAGTACAGCAGCTGAGTACACCTTATTCTGC
AAACGTGCACCTTAACTAAGCTAACGCACAGATGCCTTCCAGTCCTAAGAAGAAACGCTT
CTTCAACATCGGGTCTGTTTTCAACCCCAAATCCAACACAAACACAAACGCGGCATCGAC
CAGCAGCAACAACTCCAACCCCAGCGCCACTAACAACTCTTCCAGTGGCACACGCACCCC
CACAACAGCTACCTCGGATCCGTTGGAGTTGACTGCTTCTCCTTCGCCCTCCAACGACCT
TTTGTCCGGCCCCAAAACTACAACCACAACCAGCGACACCCCCGTGCTGGCCGACTTTGG
GAAACAAAAGGCCGGTTTCCGCAACACGTACATCAACACAAGCTCCACGGCGTCCAACAA
CCCGTTCGCAAACCTGGGAGAGCAGCCACAAGCCGCCACAGGTACCACATCGTCGTCTAG
TAACACAAACGGAAACGCGTCTCCAGCCCTTGGTGAAAGCAACCCCGTGCCCGTCGCAGC
GGGAAACAACAACAACAACAACCCTGTTGGTCTGCGTCTAGACATTACCCCCGGCGCCGT
CGAACAGGTCAAGTCGCCCTCGACCCCCTACAACAACCAAGGTCTGGCCGTGGAGGAGTT
CTTCCACGATTGCGCCGGCCCCTCCAACGATATCGTCACATCCGTGACCAGTACCAACGA
CCACCAGCACGACAGCGCCGACTCCTCAGGCGACTCCAACGACACGGACAACATTCCCAA
CTCCACGCCCCCCGAATCTCCCACCGGATCCAACTCCCCAGGAAACATGAGCATCGCAGG
CGCACCCAAACGGGTCGGCGCGGGCATGCGCTCCACTTCCGCAGCCACGCTGCATTCGCA
TGACAACGGTGGCCAGCGAGAAGTGGACCAACTGGAAGGCATGGACGAAGAAGACGATGT
CCACATGGCTGACTACGACGAAGAGCACAGCGGTCAGCATGGCGACTCCATGGACGACAC
TCCCGAACTCTCTTCTGCCGCCGGACACTCCACAACCGGAGCAGCAACAGCAGCAGCATC
CACAGCAGGCGCCGCCACGGCTGCCAATACAGGCTCCACTGCGCCATCGTCTTCACAGTC
CGACGCACCGGGCTCTGCCGCCTCCGCTGCCTCCGACGGCCCCTCTGCTACATGTGCCAC
TGCATCCTCCGCTGCGCCTCCGTCTGCGCCTTCCGAGCCCCAAATCCCGTCCATCCGACT
CACACCCGTCATCGACCATTCTACTTCCACCCCTGCACAATACTTTGGTCCCATCGAGCG
ACGTCTGACTAGTGGATCCATTCGCATCGGCCGTCAGACGGAGTCCAAGGATGAGCCCCA
GCTTCCCCAGTACGAGCGGCCCATTGTGTTCAAGTCCAAGGTTGTTTCGCGATCGCATGC
GGAGTTCTTTGTCAAGGACGACCAGTGGTTTGTGCAGGATATGCGGTCTTCCTCAGGTAC
ATTCCTCAACCGTAGACGTCTGTCGGAGGCCGGCAAGCCCTCCAAGCCCCACGTTCTCAA
GAACGGAGACATGCTTCAGTTTGGCATGGACTTCCGAGGAGGAACGGAGGAAATCTTCAA
GTGCATCAAGGTCCGAGTGGAGACGAACCAGAGCTGGAAACGAAAGGTCCAGCAGTACAA
CATCGAAGCGGTGGAGCGACTTCGAGGCATGGCTAACGGCGATCCCACTGACTCCGAGTG
TGCTATCTGTCTTGTGGCGGTGGGACCGTGCCAGCCACTGTTCATTGCTCCCTGTTCGCA
TGCCTGGCACTACAAGTGCATCCGACCGCTCATGGTCAAGACGTATCCTCATTTTCAGTG
CCCCAACTGCAGAAACATTTGCGATTTGGAGGCCGATGCCGATGAGTCCATGGTAATGGA
GGGATAAAAACATCCTTTTGGTATTACTTACTGTACGAATTTTTGAAAGGATATCGTGGC
CATGGTATATGACTCTACTAGCCAATGACTCTAGCATAGCAATGACTCTGTTGCAGCATC
CCACTAGCTAATATTAATGAAGTGTATGAAGTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18634g_CDS-001

Protein length: 612 aa.
Product: Conserved hypothetical protein

>YALI0F18634g_CDS-001 MPSSPKKKRFFNIGSVFNPKSNTNTNAASTSSNNSNPSATNNSSSGTRTPTTATSDPLEL
TASPSPSNDLLSGPKTTTTTSDTPVLADFGKQKAGFRNTYINTSSTASNNPFANLGEQPQ
AATGTTSSSSNTNGNASPALGESNPVPVAAGNNNNNNPVGLRLDITPGAVEQVKSPSTPY
NNQGLAVEEFFHDCAGPSNDIVTSVTSTNDHQHDSADSSGDSNDTDNIPNSTPPESPTGS
NSPGNMSIAGAPKRVGAGMRSTSAATLHSHDNGGQREVDQLEGMDEEDDVHMADYDEEHS
GQHGDSMDDTPELSSAAGHSTTGAATAAASTAGAATAANTGSTAPSSSQSDAPGSAASAA
SDGPSATCATASSAAPPSAPSEPQIPSIRLTPVIDHSTSTPAQYFGPIERRLTSGSIRIG
RQTESKDEPQLPQYERPIVFKSKVVSRSHAEFFVKDDQWFVQDMRSSSGTFLNRRRLSEA
GKPSKPHVLKNGDMLQFGMDFRGGTEEIFKCIKVRVETNQSWKRKVQQYNIEAVERLRGM
ANGDPTDSECAICLVAVGPCQPLFIAPCSHAWHYKCIRPLMVKTYPHFQCPNCRNICDLE
ADADESMVMEG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG