YALI0F18436g

Overview

Description similar to uniprot|Q9Y7B3 Emericella nidulans DopA developmental regulatory gene
Locus type CDS
Locus tag YALI0F18436g

Location

Species Yarrowia lipolytica Positions 2447675..2452786
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 5112 (nuc.)
Previous locus YALI0F18414g Next locus YALI0F18458g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18436g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18436gYALI0F18436g_mRNA-001YALI0F18436g_CDS-001

Nucleotide sequence

 

>YALI0F18436g
ATGTTTCGGTCAATATCGCCATTGCCATTCTGGTCCAAGGATGCGACCCAAGGTAAGTAT
GAAGAGGGTTATGGCACGCAAGCTCTTTTTTTGTTTGTGTCTGTTCTTCTTACAGCACTG
AACGCCTCAACATGAGGACATGTCACGAACGCGTTAGGGGGTGGTAGAAGAGATCCACAG
CGATGATCCGGCACTAACGACGACTGTTCGAGTGTGTGCAATGACAGGACTTACTAATTC
AGACCCAAAAATGAAGAAATACACGTCAGCACTAGAGAAGGCGCTGGCTCTATGGGACTC
GGTCGACGAATGGGCAGACTACATTTCGTTCATTGGCAAGCTGCAGAAAGCACTCAAGAG
CCATTCCAACCCATCCTACCTGCCGCTACAGAGCGAAATTGCCTCCAAACTGGCCTGGTG
TCTGCTGCCAAACCTGCCGTCAGGAGTGCACCAGAAGACCCTGGAGGTGTACCGTCAGGT
GTTTGAGATACTGCGAGGTATCGGCGACTATCACAAGAGTCTGGACGGCAAATCGGTGGA
CCCCGTGGCCCAGGGAATCAGAGTCTGGCTCCCCGGACTGCTCCCGCTCATGGCATATGC
ATCCATTAACGTCAAGCCCATCTTGATTGAGGTACTTCAGGAGGACATTGTGGAGAAGCT
GCCTCAAGCGACTCTCAAAACGACAATTCGACCGCTGCTGCTCTCACTGCTTCCCGGTAT
CGACGACGAGTCAAGTGAGTCATTCCAGGCGTGCTTTGATCTCATTCAGAAGCTCAAGCT
ACGTCTCCATGATGAGCCCTACTTTTGGCAATGCTTCTTCCTCACCATTGTATCCGCTCC
AGATAAGAGGCAAGGAGCGCTGGTTTATGCATACAAAGAACTGCCCCAGTTCTCCAAGGT
CGAGGGCATCAATGAATCCGACAAGATCATTCACAGTCTATCCTACGAAGCCCAGTCAGC
TGTCACTCCGGAATGTGGCCTGCTGATCCGGGCCTTCTGTCGGGGGCTAGAGGACGACCA
ACTCCTTGTCCAGCGAGGTTTTCTGGAACTATTAGTCAAGAACCTGCCTCTCGATTCTCC
TGTCATTACAGGCCTGGCCTCTAAGAGCGACATTTCTCTGCTGATGACAAGCGCGTGTGC
CGCCGTGCTCAGAAAGGACATGTCTCTCAACCGAAGGTTGTGGGCCTGGCTTCTTGGACC
CGATGATGTTTCCATGAAGGAGTACTTTACAACACACGGCCGAGATGCGCTTGTCCAGGG
CATCCTGGCTCTGAGTTCGCCAGTGAGAGCTTCCAAGATTTCTCTCTCGTTGATGGATCG
ATGGGAAATTGGATCTACTGTGATTCCAGAGATTCTGACACCCATTATCCAATCTGTCTA
CGACTGTGAAAAGAGACCTGACTACCAGGATATTGTGTTGTCAGCCTCCGCCTTTGTTGA
CTCAGTGGAGGCAATCAACATTTGGGCCGACATTCAAAAGATGCTCAAGACTGGCTCTCT
ATCTTTGGCTTTATTCACACTTCAAACCTTCAATCTTTCGGACGAAGAGATGATTGTCAA
GCATGCTCCTTTGGCACTACTGAGCCATCTTCTGTCTGGACGTTTTTCTCAGTGGAAAGA
GTGGAACGAGATTGCTACTCTGTTGATTGAACTCATCCCCGAGCGGGCATTTTTACCAGT
GGAACATTCGACGCTCACTGATGGCGATTTCCAAGTGTCCACTATTGAGTCCAAGGTCGA
AGAGTACTACGATGGCGAGTGGGCCGATGGATATGGAGCTGCTGATGTTTACTTGTTGCT
TCTACAGACCTCCACTCGCTTGGCTGATGAGTTCTTCCAGAAGGTCACTGCTGAATGTAG
TAATAACCCAGCCATCTTCTCCAAGCTTGCACTCATCATTTCCGAGCTACAAGCCAAGCA
GGTTTCTGGTTTTAAGTCTGAACAGCTGGAAAAAACTCTACAGCTGGCAGGTGAAGAAGC
AGTGGCTCAATTCGACCCCTTCTCCAGCTCTCCCCTGCCTTCTCTGCCTCCCGTGGCTGT
CCTGGGATGGACCAGGCTGTACCCGCTGTTCCCAGCGAATCTTCTTGCTCTGGTAGGATA
CATTTTCACATCATTAACCCCCAACTCACAGTACTACAACGGCCCTTTCCACAATGCAGA
GCTGGTCAAGGCGTTGTGGTCTCTTCAGGCTGTTCACGGTAGCGATGACAGGGAAGTGGA
GGCTGCTCTGAGTATTCTGTTTTCGAAACCCTGTGATGAGAAGTCACAAGTGTTTTCGGC
TATTTGGCAGCACTCTCTTTCGGCACCCAACTTCTCCAAGTTATTGGCTCGACCCTTGTT
CCTGTATCTCGACTTGCTTCCTCTTCCTACCTCTCAGTTGGAGCTCTATGGCAGCAATGC
AGGCAAAAACAAATTCCTCGCCTCTGATGTGTCGTCCAATGAGCTGATTTCCCTGGCTTT
TGCATCGGAGAAATCTCTTGCTGGCTCTTACTGGCTCAACACAGTGGCTTCGAGCGGGTC
GTGTGATAAACTATTCTCACTTCTCCTAGACCCTCTGTCCAAGTCCGCATTTTTCAGCCG
GCCAACCGTTGAAGGCAAGCTGCTGTTTGAAGAGTCCGATGACCTGGCTCTTTTCGCATA
CCACGTCTCAGCTCTCACGAAGGTTCTTTCTGCCAATAATTCTAGCATGGCCAAATTCCA
TTTCAACAAGGAGGAGGTGGAAGAATTTGACATCAACGATTACTATGAAGGCAAATCCAC
CTATGCCGCTTGGACTGCCAACCTGATGGCTCATTTTCTGCAATTCCAGGCTGTTGATAC
GCTGGCATACAGTTCAGCTCTGTCTGCAGTGCTCAAGCTGTGTTCCATTCTGCTTGATTC
GCCTCTCTTCCCTACTTCCAAAGCCAATTGGGAGGTATTTGTGCGCGTGTTGGTGACTAA
GCTGTCTGACTTGGTAAACCAGGACTCGGAGCTTCAGGTCATCGTGCTTGCAGTTCTTGC
CAAGGCTCTGCAGGCCTCGGATCTTTCCATGACGCTTTCCAAGAGCGAAAAGTTCATTGG
AAACGGTCCTGTGGACATCCCCTTGGTGTCTGAAACCTCAGATGTGAACATTCCCGGTGT
TTTTATTGCTGTTGTTCTGCATGGCTTGTCTTCTCGAAAGGGCGTTATCATCAGTTCGGG
ATGGATTCACTTCCTAGAGTGTCTGCTCGGAATCTACTCTACTGATTTGTTCCAGATTAG
CATTGCTATCGTCGAGAGACTGTGTGCTCTTGTTGATGGTACCCCCGTTGCTTCTCTGCA
GAAGCTTTCTACAGGCTCCAGGGAGGTTCTGGTCGAAGTTGACGACAAGGACGGCGAGAA
GGACCCTGCAGTTGGCGATACAGTCACTGATGTCACGGCACCTCTGTCTGACTCCATTAT
TCCTTACCTGACAGGTCTGGAATACTGTCTCGAGTCCCTTTATCTTGCTTACACCAAGGT
CGAGGCTTCGCAGGAGGAACTAAATCTCAACTCCACGGGGTGGATGACCAACGTGGTCAA
TGGTGTCTTATCTCTGGAGGAGCCTACAAAGGGCAATGGCTACAGAATGATTGTTCTGTT
GTGTTTCCAGAATGCCGTCAAGAGCTGCTTCAATCTGTGGCGGAAGGTCGATGGACAGGA
GGCCGAGGAATACACTTTGGACAGCGTTGTCTACCTTGGCCAGCGGTTGAAATTCCGAGC
TCGAAAAATTCTCGACAAGCTGTTCTCTTTCGAGCGAGGTGAGGTTCTTCAAATGCTGAT
CGAGCTTTCGGAGGATGATATGCCCCATGTGTTGAAGGTATTGCATGTTCTGGATGGCTC
TCGGCCCAAGCTGTCGGTGAGCCAGTTGCTTCAGAGTCTCTCAGATGACCAGAAGAAGTC
AACGGCCTCGTTCCTTTTGGCTTATGTGAAGTCTCTATCCAACGACGCTGTAGAGGACAT
TTACTCGGACTACATGGGTTTCGCCCGAACCGTCATGCTGAACCCCGTGCCCTACAAGGA
AATCTTGTCTCCCACCGTTCAGACCCTCACTATTATTGGAGTCAAGATTGATGGCAGCAA
CTTTGCCAACCGAAAGGTGAGCAAGGAAATCTCTGATGCTGTTGTGAAGCTGGTCGGACA
GGTTACCGATGAACAGACTCTCATGAAGGTGGTTCCTGTTCTGCGAACGATTCTCATTGA
CCAAGACAAGGTGAGTTCCGTTTTGCAGGGCATTGTGAACAACGTCGTGATCCCCAAACG
GTCTTTTGAGTTACTCGGCGTCATCACTCAGATCCCAGGAACCGTCAAGGTGTGGAAGAG
TGCCGTTCACGACTTTTTCATCGAGGACAACTTTGTCTACGAGGCTCCCTGGCCCCAGAT
TCTGTCCAAGTGGTCCACGTGCACCAAGGAGGTTTCTGAGCTCATCACCGGCTCATCTGG
TGTCTTCAACTGGGGCTCTCGAGGTAACAGTGTTCGACGTTTGTGTTACCTGTTGCTTTC
TGGCCAGGAAGACCAGTTTGTGCTTCATATGAAGGAGATCAAGGGCATTCTGGATGAGAT
TGAGCTCGAGTCCTTGTTCATTGCACTGCGTGCTATTGTTATGCGGTTCTCTGCCACTCA
TCTGGTTCCCATTTGGCCTCTGGTTGCCCACAACCTGCAGGTTATATTCGAGGGTCTGCT
GCAAGGTAAGGAGACGGATAACCGAATCGTGATGAGTGCCTGTAAGCTGCTCGATCTTGT
GCTGGTGCTTAACCAGGAGGATTTCCAGCTGGATCAATGGCTGTTTGTCACCGATTCCAG
TGATGCTATTTACGGACACCCTTACGGTATTCTGGATCAGTTGGCTGAGTCTACGCCTGT
CAGCAGTGATGATCTTCATCTGGAGGAGACTTCCAAGCGACGGCCTTTGCTTTTTGGACA
GAAGATTGGTTCTCTTACCTCTCTTGCACAGCTAAAGCCTTTCTTTGACCGGCTCTCCAT
TTACAACTACGAAAGTGTTTACGCTCTCAAGGAGACTGATCAGGAGGCTTGTGAGCTGGA
TCTCTTGGCCGATATCCAGGAGTAAAGATGATATATTATACTAAATAGATTAATGAATGA
ATGATATGTATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18436g_CDS-001

Protein length: 1625 aa.
Product: Developmental regulatory gene, putative

>YALI0F18436g_CDS-001 MFRSISPLPFWSKDATQDPKMKKYTSALEKALALWDSVDEWADYISFIGKLQKALKSHSN
PSYLPLQSEIASKLAWCLLPNLPSGVHQKTLEVYRQVFEILRGIGDYHKSLDGKSVDPVA
QGIRVWLPGLLPLMAYASINVKPILIEVLQEDIVEKLPQATLKTTIRPLLLSLLPGIDDE
SSESFQACFDLIQKLKLRLHDEPYFWQCFFLTIVSAPDKRQGALVYAYKELPQFSKVEGI
NESDKIIHSLSYEAQSAVTPECGLLIRAFCRGLEDDQLLVQRGFLELLVKNLPLDSPVIT
GLASKSDISLLMTSACAAVLRKDMSLNRRLWAWLLGPDDVSMKEYFTTHGRDALVQGILA
LSSPVRASKISLSLMDRWEIGSTVIPEILTPIIQSVYDCEKRPDYQDIVLSASAFVDSVE
AINIWADIQKMLKTGSLSLALFTLQTFNLSDEEMIVKHAPLALLSHLLSGRFSQWKEWNE
IATLLIELIPERAFLPVEHSTLTDGDFQVSTIESKVEEYYDGEWADGYGAADVYLLLLQT
STRLADEFFQKVTAECSNNPAIFSKLALIISELQAKQVSGFKSEQLEKTLQLAGEEAVAQ
FDPFSSSPLPSLPPVAVLGWTRLYPLFPANLLALVGYIFTSLTPNSQYYNGPFHNAELVK
ALWSLQAVHGSDDREVEAALSILFSKPCDEKSQVFSAIWQHSLSAPNFSKLLARPLFLYL
DLLPLPTSQLELYGSNAGKNKFLASDVSSNELISLAFASEKSLAGSYWLNTVASSGSCDK
LFSLLLDPLSKSAFFSRPTVEGKLLFEESDDLALFAYHVSALTKVLSANNSSMAKFHFNK
EEVEEFDINDYYEGKSTYAAWTANLMAHFLQFQAVDTLAYSSALSAVLKLCSILLDSPLF
PTSKANWEVFVRVLVTKLSDLVNQDSELQVIVLAVLAKALQASDLSMTLSKSEKFIGNGP
VDIPLVSETSDVNIPGVFIAVVLHGLSSRKGVIISSGWIHFLECLLGIYSTDLFQISIAI
VERLCALVDGTPVASLQKLSTGSREVLVEVDDKDGEKDPAVGDTVTDVTAPLSDSIIPYL
TGLEYCLESLYLAYTKVEASQEELNLNSTGWMTNVVNGVLSLEEPTKGNGYRMIVLLCFQ
NAVKSCFNLWRKVDGQEAEEYTLDSVVYLGQRLKFRARKILDKLFSFERGEVLQMLIELS
EDDMPHVLKVLHVLDGSRPKLSVSQLLQSLSDDQKKSTASFLLAYVKSLSNDAVEDIYSD
YMGFARTVMLNPVPYKEILSPTVQTLTIIGVKIDGSNFANRKVSKEISDAVVKLVGQVTD
EQTLMKVVPVLRTILIDQDKVSSVLQGIVNNVVIPKRSFELLGVITQIPGTVKVWKSAVH
DFFIEDNFVYEAPWPQILSKWSTCTKEVSELITGSSGVFNWGSRGNSVRRLCYLLLSGQE
DQFVLHMKEIKGILDEIELESLFIALRAIVMRFSATHLVPIWPLVAHNLQVIFEGLLQGK
ETDNRIVMSACKLLDLVLVLNQEDFQLDQWLFVTDSSDAIYGHPYGILDQLAESTPVSSD
DLHLEETSKRRPLLFGQKIGSLTSLAQLKPFFDRLSIYNYESVYALKETDQEACELDLLA
DIQE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG