YALI0F18458g

Overview

Description some similarities with uniprot|Q6BM08 Debaryomyces hansenii DEHA2F09262g
Locus type CDS
Locus tag YALI0F18458g

Location

Species Yarrowia lipolytica Positions 2462113..2464146
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2034 (nuc.)
Previous locus YALI0F18436g Next locus YALI0F18480g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18458g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18458gYALI0F18458g_mRNA-001YALI0F18458g_CDS-001

Nucleotide sequence

 

>YALI0F18458g
ATGCAACCCTCTATGGTTGACGAAACAGTGAATTATGTCAATGCCAGCCTGGGCCTTGAC
ATCGGAGCCTCTCCTGCCCTTGCAGACGCCTCCGCCTCCTCTAACACCTCCGTGCCCAAG
TCTATCTTTGTGGAGACCCACCGACCCCGAAGAGCTTCCATTTCTTCCGGTCACATTGCC
AAGGCTACTGCTGCCGTTGCCGCCCTCCAGGAGCAGCAGAAGCAGCGACACGGCAGTCAC
CGAAGCGAGTCTGAGCACACTCGACTCGTTGAGGGCGCCTGTCGACACATTGCCGAGGCC
GCCGCTCAGGCAGCTGTTGCCGCCGTAAAGGACAACGACGTCCAGGTCGAGGAAGACTCT
CGACGAAAGGTTGTGAAGATCCAGCGAAAGCGACGACGAGGTGGTATCCTGGGCTTCAAG
GAGCTTGCAGCCAAGTCGGGTCTGTCTCCCTGGCACTTCCACCGAGTCTTCCGATCCATC
ACCGGCCTGACTCCCAAGGCTTATGGTGATGCTTGTTGGAAGGCTGTTACCAACAAGCTG
TCTGACCCCGAGCTGCTCACCAACATCAAGGAAGAGCACGGTGTGTCCACCAAGACTGAA
ATGGAGCCTCCTAAAGAGAACCACTCCGCCTCGGTCACCCCCCAGCACACCCCTACCATG
GCCCAGTCACTGCCTACGCCTTCCTACCCCTTTGAGCCTGTGACTCCGTTCGAGGCAGCC
CCGGCTATGACTTCCAACCCTATGCCTCAATTTGATAACACTCCTTTCGAGTCTATGTCT
TACGAGCCTCCTTTTGAGACGTGCTCCTCCATGACTTCTCCCGAATCTACTATGTCCTTT
GATGTTCCTTTCATGTCACCTCTGGCCAACAATGCCACTCTGACAGCGCCTGCATCCGCA
GTTTTTAACACCCAACAGCAGTACTACTACGACTGGTACCAGATGCCCTCCGAGGTGCCT
AACATGCCCATCGGCACTCCGACAACACAGCCTTCTTTCACCCTTGACATTCCTGATAAT
ATGTCTGATTCTACTGCCACACAGCCCATGTCTTGCCACTCGGCATCGTCGGCATCTTCT
CTTTTGGACTCGGTTCACACTCCAGGTGAAGAGTTCAAAGATGAGATGGCTTCTTGGATT
GATACCAAAGACACCTTCACCGTTGACCAGAACCCCTCTTATGTCGACATGGGCTTCCAG
TAAGCTGGCACTTACTGAACCATTTATTTATTGAATCTACTCACCCTCTATTGTCTACCT
AAAACAACTAACCCCCTTCCCTCCTCTCCTCCAGATGCCCCGATGTTGATCATCAATTTC
TATTGATTTTACAATGCTCCTTTTTTTGTCGCTGCAGCTTTGAAAGCCGGCACACTTGTT
GATCACAACCAGTCCGATTCTTCTTCCACTATTGTTTGATATCTGTTTCTTGCCCATCCA
TCTGTGCAGAACAGTTCACAATCACGTTTCCAATCACCATCTTTCGCCACATGTTTCACC
ACCCTTTTTTCGAACGTTCTTGCTGCTTGCGAGGAATGCTTCTCATTCTGATCTTTGTAC
TTTTTTATTTTATTTATTTCGGACGACGTTTGTTTTATCATGTTTTTCTTTCCACTTTTT
CTTTTCCCCCACAAAAAACCTTTGGGCAGCGACACCACTGTAGACACTTGTATGCTAACC
ATCTTTACTCCCTTCTCTAGATCCCCGATTCTCGAACAGCTCCGAACCCATGCGAAGAGT
CCGATTCCACTCAGTCCACTCCAATCTTCAGTCAGCCCACTTCCACCACCGACCATGGTT
GCCCTCTCTACGCCTCCCTGCGTCTTTTTACGCCTTCCCACTCCTCCTCGCTCCTCCCAC
GTCGCCGCCTTTACGTTTGTTTCGCCACCGAAAGATACCCCTTCCTCTTCTTCATGTTCA
TTTTTTTGACTGCCTCTGAAACACTTCACGTGTGGACGGGTGACCGTTTCCGGTAAGCTT
CTGCTGCTGGATAACTTTAACTGATCTATATATTGAAATTCCACCTTTTTGTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18458g_CDS-001

Protein length: 401 aa.
Product: Conserved hypothetical protein

>YALI0F18458g_CDS-001 MQPSMVDETVNYVNASLGLDIGASPALADASASSNTSVPKSIFVETHRPRRASISSGHIA
KATAAVAALQEQQKQRHGSHRSESEHTRLVEGACRHIAEAAAQAAVAAVKDNDVQVEEDS
RRKVVKIQRKRRRGGILGFKELAAKSGLSPWHFHRVFRSITGLTPKAYGDACWKAVTNKL
SDPELLTNIKEEHGVSTKTEMEPPKENHSASVTPQHTPTMAQSLPTPSYPFEPVTPFEAA
PAMTSNPMPQFDNTPFESMSYEPPFETCSSMTSPESTMSFDVPFMSPLANNATLTAPASA
VFNTQQQYYYDWYQMPSEVPNMPIGTPTTQPSFTLDIPDNMSDSTATQPMSCHSASSASS
LLDSVHTPGEEFKDEMASWIDTKDTFTVDQNPSYVDMGFQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG