YALI0F18260g

Overview

Description some similarities with uniprot|Q03973 Saccharomyces cerevisiae YDR174w HMO1 Non-histone protein
Locus type CDS
Locus tag YALI0F18260g

Location

Species Yarrowia lipolytica Positions 2428449..2429312
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 864 (nuc.)
Previous locus YALI0F18249r Next locus YALI0F18282g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18260g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18260gYALI0F18260g_mRNA-001YALI0F18260g_CDS-001

Nucleotide sequence

 

>YALI0F18260g
ATGGCTAAATCAAAAATCTACTACACGCCCAGCGACATCACTAACACAAAAACCCTGCAC
GATAACGCCGCCACGGTGCAATTCCTCACCTCGGAGCTCACCGAGAGCGCAAAGGTTGCC
GCTCTTGTGGCCACTGAGAGCTGGCAGCGACTGGTCGAATGTGTCGCCCACACCCGGGGC
CTCGACAACAAGGAAACCAAGGCGTTTGTCGAAAAGTGGAGCCCCGACAACGTGGACATC
ACTCTCAGCGAGGAATTGTCCAACGGCAAGCGGTTCCGAGATGAGGTGGAGCTCACCCCC
ACCGGCCGTATCAAGAAGAAGCGTGTGGTGGACCCCAACATGCCCAAGAAGCCCATGACC
GTCTTCCTGGCCTTCTCCACCAAAAAGCGGGCCGAGATTCGAGCCGCTCGACTGGCCCGA
GGCGAGCCACCTCTCCAGAACTCGGAGATGGCCAACGAGGTGGCCGAACTCTGGGGAAAG
CTGTCTGACGCTGAGAAGGAACCTTACCAGATTGAGTACCAGAAGAAGCTGATCGACTAC
CAGAGCCGAAAGAACAAGTACATTGAGAGTAAGGCTGCCAACGTGGCGGCCGCTGCCCTG
GCCGAGGAGGTCGAGGAGGCCGAGGAAGAGGCCGAGGAAGAGGCCGTTGAGGAAGCCGTT
GAGGAGGAAGAGGAGGAGGAGGAAGATGAGGAGGAGGAGGAGGAGGAAGAGGAGCCCGAA
CCCATCAAGTCTCCCAAGAAGAACAAGAAGTCCAAGGACAAGAAGAACAGACGCTCCTCC
AAGTCTAGCAAGGAGTAGACTGGAGTCCGCACGAGGAATATGTAATATTAATGTATTAGT
ATAATGATTGTGGTTGACAAGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18260g_CDS-001

Protein length: 266 aa.
Product: Conserved hypothetical protein

>YALI0F18260g_CDS-001 MAKSKIYYTPSDITNTKTLHDNAATVQFLTSELTESAKVAALVATESWQRLVECVAHTRG
LDNKETKAFVEKWSPDNVDITLSEELSNGKRFRDEVELTPTGRIKKKRVVDPNMPKKPMT
VFLAFSTKKRAEIRAARLARGEPPLQNSEMANEVAELWGKLSDAEKEPYQIEYQKKLIDY
QSRKNKYIESKAANVAAAALAEEVEEAEEEAEEEAVEEAVEEEEEEEEDEEEEEEEEEPE
PIKSPKKNKKSKDKKNRRSSKSSKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG