YALI0F18282g

Overview

Description weakly similar to uniprot|Q8TFK5 Yarrowia lipolytica YALI0E18788g CWP1 Cell wall protein of the PIR family
Locus type CDS
Locus tag YALI0F18282g

Location

Species Yarrowia lipolytica Positions 2429569..2430345
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 777 (nuc.)
Previous locus YALI0F18260g Next locus YALI0F18304g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18282g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18282gYALI0F18282g_mRNA-001YALI0F18282g_CDS-001

Nucleotide sequence

 

>YALI0F18282g
ATGAAGTTCTCCGCTGTTCTCCTCGCCTCTGCCGCCGCTCTTGTCTCCGCCAAGAAGTTC
ACCATCGTCGCCATCCGATCCGGATCCGACATCCAGAACACCCCCGTTGTCTCTGACGGT
AAGAAGCTCGTTCTCGGCGGTGAGGGCGGTATCCCCACCACCTACGAGGTGAAGGACGGT
GTCCTTTACGCCAACGACAAGGCCGTCCAGTTCGGCAACGGAGCCACCATTGAGGATGGT
GAGGGTCAGGGAACCGACGGCGTCACCGTTGACGGCCAGGACCACCTTTACGTCCCCAAC
TACTCCTTCACCGCTTGCGCTGCCCAGGGCCGAGCCTACAAGTACACCGTCACCTCTTCC
GATGACTGCAAGCAGGGTGCTACCCCCTTCGCTGCCCGTGTCATCTACGAGGACGACAAC
AGCTCCGAGTCTGCTGCCGCTAACGGTACCGCTGTCACCAAGACCGGTGTCGTCACTGCC
CAGTCCACCCAGCTCGTCACCATCACCTCTTGCGAGGACGACAAGTGCCACAAGCCCACC
GCCGCCCCTGCCCCCGGCTCCAACAACGGTGCCGTTGTCTCCCAGATCGGTGACGGCCAG
ATCCAGGCTCCTCCTTCCGCTGCTCCCGAGCAGGCCAACGGTGCCGCTGCCCTCGGTGTC
TCTGCCGCTGCCGCCGGTGTTGTTGCCGCTGCCATGCTTTTCTAAGCTTGGTGTGATGTA
TACTTACTGATCATGATATCCTAATAAACTTGTAAATGGTACTCAAAGTACGACTTC

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F18282g_CDS-001

Protein length: 235 aa.
Product: Cell wall protein, putative

>YALI0F18282g_CDS-001 MKFSAVLLASAAALVSAKKFTIVAIRSGSDIQNTPVVSDGKKLVLGGEGGIPTTYEVKDG
VLYANDKAVQFGNGATIEDGEGQGTDGVTVDGQDHLYVPNYSFTACAAQGRAYKYTVTSS
DDCKQGATPFAARVIYEDDNSSESAAANGTAVTKTGVVTAQSTQLVTITSCEDDKCHKPT
AAPAPGSNNGAVVSQIGDGQIQAPPSAAPEQANGAAALGVSAAAAGVVAAAMLF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG