YALI0F17182g

Overview

Description weakly similar to uniprot|Q8KCX2 Chlorobium tepidum Hypothetical protein CT1285
Locus type CDS
Locus tag YALI0F17182g

Location

Species Yarrowia lipolytica Positions 2299059..2299679
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 621 (nuc.)
Previous locus YALI0F17160g Next locus YALI0F17204g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17182g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17182gYALI0F17182g_mRNA-001YALI0F17182g_CDS-001

Nucleotide sequence

 

>YALI0F17182g
ATGCCCACCATTCACACAGAAATCGAAATCAATGCTCCCGCAGCAGTCGTCAGCCAGATT
CTGTACCAGTTTAACAAGTACCCCGAATGGAACACCTTCCTGACCTTTGTCCTGGGCAAC
TCCAACGACTACTCTCACCGACCCCAGGAGCTGGCCAACGAACACATCACCATCCAGGTG
TGGACCCCCGGCAAGCAGAAGCCCCAAATCTTTGACTGTGTCGTCAACAAATGGGAGCCC
AACAACCTGTCATGGGAGGGCCATCTGCTCAGCAAGCACATTATCAAGGGCGAGCACTAC
TTTGAGATCGTGCCTGTGAGCGAGAACAAGTGTATTTTCAAGCATGGCGAGAACTTTAGC
GGCGGGGTGGCCGCAGTGGCCTCCTTCACCTCTGTGTTTGAAAACCTCAAGCCCAACTAC
GAGCGAATGAACCAGGAGCTCAAGAAGCGGGCTGAGGCCGGCGTCTCAAAGCTGTAAGCA
TGCTCATGCACCTGAAATGACATGACATGGCATGGCATGATATTGGCCATTGCAATGGAA
CGCGCTCTGTGTGCAACTACACACACATTGATGTATATTTAATTCACGGTAACTTGTGTT
GCCCATGATCCTAAAACACCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17182g_CDS-001

Protein length: 159 aa.
Product: Conserved hypothetical protein

>YALI0F17182g_CDS-001 MPTIHTEIEINAPAAVVSQILYQFNKYPEWNTFLTFVLGNSNDYSHRPQELANEHITIQV
WTPGKQKPQIFDCVVNKWEPNNLSWEGHLLSKHIIKGEHYFEIVPVSENKCIFKHGENFS
GGVAAVASFTSVFENLKPNYERMNQELKKRAEAGVSKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG