YALI0F17204g

Overview

Description weakly similar to uniprot|Q9C228 Neurospora crassa Related to CSI2 protein
Locus type CDS
Locus tag YALI0F17204g

Location

Species Yarrowia lipolytica Positions 2301217..2302437
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1221 (nuc.)
Previous locus YALI0F17182g Next locus YALI0F17226g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17204g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17204gYALI0F17204g_mRNA-001YALI0F17204g_CDS-001

Nucleotide sequence

 

>YALI0F17204g
ATGAAGCTCAATCCCATGGTCCTGGTGCTGGCCACGGTAGCCCTGGCCTCCACCATCACA
ACTCCCCCTCCACGAGCCACCCTGGCTCCTCGGCAGGACAACACAGATTCCAAGGATGAC
AACAACGAAAGTATCGTGACCCGGTTCACCGCCAACAAGAGCAAAAACACCTTCACCGAG
GAGCCACCGACCCTGACGCTCCCCGGCATGCCCACCTCGGAGCCTGTCATCCCCTACACC
GAAGATAACCCCTACGTCAACACATCCAAGTACCCCGAGGGCACCGTGTTCATCTGTGTG
GGTTCCATTCTGGGAGGTCTCACACTGCTGGTCACGGCATGGCGATTCGGTGTCGCATGG
CACATGAAGAAGCAAATCAAAAAGGCCAACGCTGCCGAGCCTCTCATGGCTGCTTACCAC
AACAAGAACCCTCGGCCCAAACGTAAGTTCGACCACAAGTCCTTGTTCCCCACGGAAAAC
CCGTTTGGAAATCACGCAGAGCTGTCCATGGACAACCTGTCGCCTCAGGGCAAGAGCATG
TCCAAAGCGCAGGCGGCCTCCATGGCCGCCCACAAGTCGTCGCTTTTCTTCTCTCCTACT
GCCGAGGTGATGAACGCCCAGAAAAATGGTGGAGGAATGGGCGAAATGCAGCAGCAGCCA
GCCTACCACCCGGGATCGTCCGCAAACTCATTCATGGGCTTCAACAACTCCGGAAACAGA
TCTACTGCATACCTGCCTTCGGGTTACTATGGCCCTCAGTCTGGCCAGTTGAACTCCATG
ACCTCGCAGTCTCGAGCCAGTATGAGAGGCTCCATGATGGCTCCTTCCATGGTTGGAGGA
CGGGCCAACTCGCTGCGACCTATGAGTCACATGGACGGACAGAGTGGAAATATTGGAGGA
GTCCGAGCTCCTTCTGCTTTCTTGGATGACATGCTCAAGGACGACATGATGAGTGAGGAC
GAGAGAGAAAAATAGCTGTAGTGAGCAACAGTGAGCACCAGCAGGCAAGTGAAATGATCA
CTTATATCTATTCACGAGAGACGAGAGATTCTCATGTCGGTCCCTGTCATCTGCAGAGGT
CTTGAGGTCTGAGGAATGGGCTCAGACAGGTATTGTTGGTGGGTTATTCGATGGCATTCT
TCAGTGTGGTACGCATCTGTACCCGTACAAGCAACTGAAAAGTAGTAGCAATGGCATGTT
AATATGAAATTATGCGGATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17204g_CDS-001

Protein length: 325 aa.
Product: Conserved hypothetical protein

>YALI0F17204g_CDS-001 MKLNPMVLVLATVALASTITTPPPRATLAPRQDNTDSKDDNNESIVTRFTANKSKNTFTE
EPPTLTLPGMPTSEPVIPYTEDNPYVNTSKYPEGTVFICVGSILGGLTLLVTAWRFGVAW
HMKKQIKKANAAEPLMAAYHNKNPRPKRKFDHKSLFPTENPFGNHAELSMDNLSPQGKSM
SKAQAASMAAHKSSLFFSPTAEVMNAQKNGGGMGEMQQQPAYHPGSSANSFMGFNNSGNR
STAYLPSGYYGPQSGQLNSMTSQSRASMRGSMMAPSMVGGRANSLRPMSHMDGQSGNIGG
VRAPSAFLDDMLKDDMMSEDEREK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG