| Description | some similarities with uniprot|P35845 Saccharomyces cerevisiae YAR042W SWH1 (ohnolog of YDL019C) Protein similar to mammalian oxysterol-binding protein |
|---|---|
| Locus type | CDS |
| Locus tag | YALI0F16940g |
| Species | Yarrowia lipolytica | Positions | 2275912..2281122 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Antisense |
| Chromosome | YALI0F | Total length | 5211 (nuc.) |
| Previous locus | YALI0F16918g | Next locus | YALI0F16962g |
Here is a representation of the structure of the locus YALI0F16940g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0F16940g
ATGTCACAGCCCAAAACGCTGGATCCCCGGGCTTCCCGACAGCCCAATTCCCAGATCCAG
ACCCAGGCGCCACCAGTGCCAGCTTCGTACCAGGAGCAGCGCCAGCCTCAGTCTGCGAAT
CACCATACCCCGTCCACAACCCAGCAACAGCCTCTTTCCGAGCCTACCTTGCAAGTTCAG
AGTGAGTAAATGAGATAGGAGACGACACAGACACGGACGACTACATGGACAAGACAAGGT
CATTACAACCACACGGACGACACGGACGACACGGGCAACAAAGACCACGACATTGAATGA
TTGACAGAGATGAAGAAGTTACCATACTGGCGCAAATGAGAAACCGAAACGACAGCAATT
GAATTGCCAGCCACCATCGGACATCCCCACCCGACATCACCTTAGTTGGACCATTACAGT
AATTTAGTATTCTGCATGTGGTTCATCACACCAACAGCCCACTATCTCACGCTGTGATAT
TCAAAGTATCCAGGATGCACAGATACCCCATTGGAATCTCGTTCCGACACCTGGTGAAAG
CGCAACTTGCCTGTTTGTGCAACTGTCCGTCTTTGTACCTTCCTTCACTCTTTACCCCTC
TCTAACACAGACAACAATGTGGAGCGATCTATTGCTCGACTGAAGATTGTGTCCACCCTC
CGATCCAACGATCTGGAGCGAATCCAGGCTATTGCCGAGGGTCCCCACGCCAACACGGAG
CTTCGAAACGATCTGCTCGACATTGCCGTGCAGGTATCTGACCTCGAGGTGGTCAAGTTT
CTGCTCCAGAAGTACCCCGATATTGATGTCAACGCACAGACTGCGCCTTCCGATGAGGAC
ACTATCTACAACAAGACCCCCCTGCATCTAGCCGCTGAGCAGGGCCGAGACGAGGTGGTC
CTGTTTCTGCTGCAGCAGCCCGAGATCGACGATACCCTCGTGGACTCGCTGGGACGACAG
CCCATGGAGGTTGCCCGATACCCCGAGATTGCAGAGACGATTCAGACGGAGCGAAACAAG
TTTGTGGAAAAGATCTCCAACGAGATGAAGGTGGCGTTCGACCGTGGCGATCTTCAGGGA
ATTGACGCTCTGTTGACCAACCCCAGATCGTCGTCTCTTCTCGACATTAATGGCCACAAC
CCCGAGACTGGATCCACCGTCCTCCACGACTTTGCACACAGACGAGATGCTCGAATGGTC
GAGTTCATCTTATCGCACGGAGGTGACCCTCTTGTTCGAAACAAGAATGGCCAGCTCCCC
TCAGATCTGACCAAGGACGAAACCATTCGACAGTTGCTCCAAAAGTCTACTGCCAAGCAG
CAAGTCATTTCCGAGGCTGATATCGCCAACGGACCCCCCAAGCAGTCCAACCCCGCTCCT
CAGATGAAGGGTTTCCTCAAAAAGTGGACCAACTTCACTTCTGGATACAAGCTGCGTTGG
TTTGTGCTTGAGGATGGTGTTTTGTCCTACTACAAGAAGCAGGACAGCACCGACACTTGT
CGAGGCTCTATCAACATGAAGAACGCCTACGTACGGCTCGACAAGAGCGAAGATCTCAAG
TTCGAGGTTGGCTCAAAGGTCCAGGGCGGCTATAAGTTCCACCTCAAGGCCAAGCATCAC
GTTGAGACCAACAAGTGGGTTTGGAACATTAGCAACGCCATCAGATGGGCCAAGGACCAG
GAAGGTGGCAGCAAGAAGAAAACAAGATCAGCTGCTACAGCAGGTGGAGCTGCAGGAGGC
GCTAACACAGGAGGCGCTGGCAATGCCATTCCCAGTGGCGGAGCTTCTCACGGAGCTGCC
GCTGGTGCCGCTGCCGGCGGTATTACTGCCGCTACCAGTGGTAACAATCTGCCTCCTCCT
TCAGGCCCTCCCCCCGCCATCCCCGCTGCTGCTTCCGAACGACCCATTTCTGCCTACAGT
AACAACCAGCTGTCTCCTTCTGACGTTGTTACTGGATCTGCTTCTGTGCGATCTCGAGCT
GCCTCCTCTTCAGGTGCTCCCGATGAAGAGGTCGATCTTGAGGAGTATGCTTCTGACGAT
GACGATGACACCAACGACGCTGAGGATCTCGCACAGATGGGAGCTCCAAACGACGCTGAC
TACGCTTTCATGGGCCGATCTATTGGTCTGGAGTTTAAGATGATCCGAAACGCTCTGACT
ATTCTCCTTCAGTCCAACGACAAGGGCGAGCTGAATCCTCGAAACCTCGGCCTTGGCCTT
AAGGCTCTAGAGGACGGAGTTTCACAGCTTGAGAGGCTCCACCAAGAGTACACCGGAATG
ACTCAGACCCGAGAGGTGTACTACCAGCGACGTTTGGCCCGAGAGATTGACATTCAGCAT
CTCTGGGAGCAGAATGTCCAGAGCCTGGAGAAGGAGCACGAGAAGATCCAGCGAGAGCTG
CACGAGGCCACCCAACAGAAGAAGAAGGCTCGACGAAGTCTGCGAGAAGCCTACACTTCG
TACCAGCGAAACTCTCTTTCTGGCGCTATGTCTCCTGACCCTTCCATGCACAACCTTCAC
GGAGTTGCCGCTGGCTTTGCTTCCCCTCCCTTCCCCGAAGCCCCCGAGTTTTCTGACGAT
TCTGATGATGAGTTCTTTGATGCAGATGATACTCAGGACATTCCTGAGATCCAGGAGCCC
GGCTTCGACTTTGAGGAGTCTCAGTCATCCGCTGGTCCCGGTGTTCGAGGCGCTGCAGTT
GGCGGCCTTGCTGGTGGAGCTGTTTCTCGATCTGCTGCTCCTAACTCTGCTCCCCCCGCA
GCTCCTGCTGTTCCCAAGTCCCGATTCGATCCTGGCCCTGCTGCATCTCACGCTGCTTCG
GCAGCGCACACTCCTGCTCAGAATCCCTTTGGTATTGCTGTCGCACAGGCCGATGCCTAC
GAGGCCGTCAACGATGGTGCTCGAGCTCAGCCTGCCCAGCCTGCCAAGTCTATCAACGAC
CCCTCTCCTCTTGCCCAGACTCCTTACACTGAGCATACTTCTTTCATGGGTAGTCAGCCC
GGACAGTTGCAGCCCGGCCAGTCTCAACGATTTCCTCACGGTCAGCAGCAGCACGGTCAG
CAGCAGCACGGTCAGCAGCAGCACGGTCAGCAGCAGCACGGTCAGCATGTCCAGCCCAAC
CAGACCCACGGCCATTCCCAGAACCCTGCTCAGGCTGCCGCTGTGACTGCCTCCCAGGCC
CACAAGTCCCACCAGCCTCTGTCCCAGCCTCCTCTGCACAACCAGCCCGGCCACGCTGCC
ACTCCTTCTCGAGATTCGTTTGCCGCTCCTCCTTCAAGAGACTCTCACTACTCTCAGAGC
TCTTCTCACTACGGTGAGGGAAGCCGACCTCAGTCCGTGAGACAGGATAGTCGACCCCAG
TCCGTCCGTTCCGTTGCCAGCCATGAGCGACCTCATTCCCGAGACCAGCATGGTCAGCAG
GGACAACAGCAGTACGGTCAGCAGCAGCAGTACGGTCAGCAGCAGCAGTACGGTCAGCAG
CAGCATGGTCAACACGGTCCACCATATGGACAGGCCCCTCCTGTGCCCCAGGGCCAACCC
CAATCCCACCCCCAGGCCCACCAGGGCCCTCAAGGACAGGCTCCTCCTGTGCCACAGTCT
CAATCTTATTCCCAGGCTCCCCAGGGTCAGGCTCCTCAAGCCCAAGCCCCTCCCGTTCCT
CAGGGTCAGCCTACGCAGGCTCCCCAGGGCCAGCGACCTCCTATCCCCCAGGCCCATTCT
GGTCATGGTGTTGGAGGAGCTGCTGCTGGAGCTGCTGCTGGAGCTGTCGGAGCTGGTGCT
CTTGGTGCCGGCGCTGCTGCTGGTTCTCGTTCGCAGTCTCAGCAGTCCCTCCCCCTGTCT
CAGTCCCAGTCCCAGCCCAAGGCCCAGTCTCAACCTCAGTCTCAACCCCAGCAGAAAAGT
GCGCAGCCCAAGTCTGCTCCCAAGAAGGACATTTCTCTGCCCTTTGGTGTTGGCGAGGTG
AAGCTTGAGGTCGAGGATCAGAAGGAGAAGTGGGAGGAGATTCTTGACGAGAACTCCTTT
GCTGGTTACGAGGACCCCCCTCGAAAGCAGCTCGCTATTTCTGCTGATAATCGACCCAAG
GTGTCCCTTTGGGGTATTCTCAAGAACCTGGTTGGTAAGGATATGACCAAGATGACTCTG
CCTGTGTCTTTTAACGAGTGTTCTTCTCTTCTTCAGCGAGTCGCTGAGGATATGGAGTAT
ACTGATCTGCTGGACAAAGCTCGAACTTTCGACGACTCCACCAAGCGACTGGCTTACGTT
GCTGCCTTTGCTGCTTCCGAGTACGCTTCCACCACTCTTCGAGTTGCGAAGCCCTTCAAC
CCTCTTCTTGGTGAGACTTACGAGTACGCTCGACCCGACAAGAAGTTCCGATTCTTCAGT
GAGCAGGTTTCGCATCATCCTCCTATCGGTGCTTGCCATGCTGAGTCCCCTTACTGGGAC
TACATGGGTGAGAGTAATGTCAAGTCCAAGTTCACCGGTCGAGCTTTCGATATCAACCCT
CTTGGTACTCTGTTCCTCAACCTGCGACCTGATAACGCTCCCCCGGAGTTGTACACATGG
AAGAAGGTCAACACCCAAGTTGTCGGTATTATTACCGGATCTCCTGTCGTCGACAACTAT
GGTGATATGACCATCACTAACCACGACACTGGTGACACCTGTACTCTTCATTTCAAGGCT
CGAGGATGGCGAGGAGCCGGCGCCTTCGAGGTCAAGGGTAACGTTGTGGACAAGAACGGC
AACCCTCAGTGGACCGTTGGAGGACACTGGCACGAAAAGTTCTATCTCAAGAAGCATGGT
TCCGAGTCTAAGGAGGTCATTTGGGAGGTCAATCCCCGACCTCCTGCGCCTTTCAACCTT
ACGCCTTTTGCTATCACTCTGAATGCTCTTCCCGATCGTCTCAAGCCATGGTTAGCACCG
ACCGATACTCGTCTTCGACCAGATCAGCGAGCCATGGAAGAGGCTCGATACGACGATGCT
GCAACGGAAAAGAACCGAGTCGAGGAGAAGCAGCGAGCCGCACGACGAGAGCGGGAGGCT
AAGGGTGAGGTGTACAAGCCTCGATTTTTTGAGGAAGCCAAGCACCCTGTCACTGGCGAG
ACTTACTACAAGTACAATGGAGATTACTGGAAGGAGCGAGGTGAGAAGAATTTCACTAAT
GTGATGGATATTTTTTAATGTATACTAAATGAATTGATTTGATGTTTGATG
Locus sequence
Up/downstream sequence
Protein length: 1583 aa.
Product: Conserved hypothetical protein
Browse the locus neighborhood with JBrowse:
ATG