YALI0F15631g - VMA1

Overview

Description uniprot|Q6C1K0 Yarrowia lipolytica YALI0F15631g VMA1 H+Transporting ATPase
Locus type CDS
Gene name VMA1
Locus tag YALI0F15631g

Location

Species Yarrowia lipolytica Positions 2100559..2101925
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1367 (nuc.)
Previous locus YALI0F15609g Next locus YALI0F15653g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15631g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15631gYALI0F15631g_mRNA-001YALI0F15631g_CDS-001

Nucleotide sequence

 

>YALI0F15631g
ATGTCGCATGCTTTGAACGATGATCAGGTGAGTAGAGTGGAAGGAGAAGGGCATGACAAA
CCGACAGCCAACACAATCAGGGATGGACATGTTGCCCACGAGTGACACAAACACGGACGT
GGGGAGGAGACACAGATTCTGGTATTCAAATGACGCAATTGAAAGGATTGACTTGGTGGT
TGATTGACTGGCGTACTAGACATGTGACAATTCATGTGCCGCATGTCTTGTGTACATTTT
TGTCACATGACAACGACACATGTTGGAAAGATGCCAAAGTTGTTCGGGTGACCTCAGTGA
TATGCCATCTTCGTCTACCAACTACTGTTGTGTTCTCCTACTACGTCTGGGGTGTTTCAG
ACTTGTGCAGTATATGGTGTCTATGGAAACATCTATTTGTGTCTTCTGTTTGTAGCCTCT
GTTTGTGGCCTCTGTTTGTGGCCTCTGTTTGTGTCTTCTGTTTGTGGCCTCTGATTGTGG
CCTCTGTTTGTGGCCTCTGTTGTGCCTGTCAGTCGTCATATGTGGAAGCCCCCCGCCCGT
GAATGATTGCCACGGATTGGTTCTGCCCGCACCATACTAACCCAGGTTGCCGGAGAGCTC
CGGAAGATGGTCGACTTCATCCAAAAAGAAGCCGAGGAGAAGGCCAAGGAAATCGAGCTG
AAGGCCAACGAGGAGTACGAGATTGAAAAGGCCAACATCGTGCGAGCTGAGAGCTCCAAC
ATCGACACCCAGTACGCCGTCAAGGCTAAGCAGGAGTCTCTGTCGCAGCAGATCACCAAG
TCTACCATCAACAACAAGGCTCGTCTCCGAGTCCTTGGCGCCCGACAGGAGGTTCTGGAT
CAGTACTACGAGGCTGCGGGCAAGCAGCTCAAGGACGCCTCCAAGGACAAGTCTAAGTAC
ACCACTGTCCTGCAGGGTCTTATTACCGAGGGAGCCTACACTCTCCTGGAGCCTGTCATT
TACGTCCGAGCCCGAAAGGCCGATCAGGATATCGCCAAGGGCACTTTTGATGCTGTTTCC
AAGGCCTACGAGAAGGAGACTGGCTCCAAGGTCGAGGTTAAGCTTGACGACGAGGTTCTC
CCCGCCGAGTCTTCTGGAGGAGTCATTGTGTTCAACGGTACCAAGAAGATTTCCGTCGAC
AACACCCTTGAGGAGCGACTCAAGCTTCTGTTTATTGAGAAGCTTCCTGCCATCAGAACC
GACATTTTCGGACCTTCCCCCACCAGAAAGTTTTTTGATTAAGTGGAATGACGAGGCTTA
TCGGATGGTTTTAGAGCAGCCAGTTACAACGTACTGGTTTTGGTGCAGCCAAGGCTGGTA
GCAGTTGTCTCAGGTTCATCAATAGTTTAACAGTATTTGTAGTATGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15631g_CDS-001

Protein length: 228 aa.
Product: H+Transporting ATPase
Gene: VMA1

>YALI0F15631g_CDS-001 MSHALNDDQVAGELRKMVDFIQKEAEEKAKEIELKANEEYEIEKANIVRAESSNIDTQYA
VKAKQESLSQQITKSTINNKARLRVLGARQEVLDQYYEAAGKQLKDASKDKSKYTTVLQG
LITEGAYTLLEPVIYVRARKADQDIAKGTFDAVSKAYEKETGSKVEVKLDDEVLPAESSG
GVIVFNGTKKISVDNTLEERLKLLFIEKLPAIRTDIFGPSPTRKFFD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG