YALI0F15653g

Overview

Description some similarities with uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1, 4-glucan glucosidase
Locus type CDS
Locus tag YALI0F15653g

Location

Species Yarrowia lipolytica Positions 2102890..2106199
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3310 (nuc.)
Previous locus YALI0F15631g Next locus YALI0F15675r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15653g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15653gYALI0F15653g_mRNA-001YALI0F15653g_CDS-001

Nucleotide sequence

 

>YALI0F15653g
ATGAAACCATTCTACCTGTTGGCACTGCAGGCACTTTTAGTGGTTGCCAAGGAGGTCGCA
TCGCCTCTGACCTCTCTTGATGTCCACACTCTGGCTGATAACTCCAAGGAGGGCAAGTTC
TCTGCCCAGTGGATCTGGGACTTGGACTTTGAGCTCAATCCTACTGCTGACGATATCCAG
TCTGGCGACTACTTCACTTTTACTGTTGACAACCGGGCTAGTGTTCCGTCCCATGACTTC
ACAGTCAAGGACCAGAACGGAAACGACATCATGCAAATCAAGAATTCTGGAAACACTTTT
ACTGCCACCTACACTGACTCAGTTCAGGGAAAGACTGACCTTTCTGGAGACATTTCTTTC
GAGGCTCCGTTCGACAAGTCCAAGCTTGGCGAGACGGCTGAGACCATCATTGTTACTGTC
GAGTCTGGCTCGCAGACTCTCTCTGATACTATTACCATCGATCCCAGCATAGAGGTTTCC
GAGGCCCATGTATTTGGACAGCGAAAGGACGACATGTTTGCATGGACTGTCAGATTTCCC
CAGACCCCTTGGGACCGAATTCAGTTCACAGTTACAATTCCTGATGGAAACTCCGCCTTC
AAGAGCGTCAAGGATATCAAGGATAACATGGTGCTGGAGCTGCTTCACGACGTTGATGAG
TTTGGAAATCCTTCTGGTGTGACCCCCATCAACCCCTATGAAAACAGTGACTACACCTCT
GTTACCAAGGCGGATCCTACTTCATTCACTGGTCGACTTTTCAACCTCCCCAAAAACCAT
CCACAGGGCGAGTACAACGTAGACATGTCCTTTGTTTCTCATATCGAGAAAATTGCTGAG
GTTTACCATCTGGAAGTTGAATGGACACTGTGGTACCATGCTAACCCCAACGAAGATACT
CGATGGACAACCCCCGGGGACAGAACCGGTACTGCTGCCGGAGCTGCCGCCTACATTTGT
GACGCCTGCCCACCCGAGGGCGGAGGATCTGCTTCTGTAACCGAGTGTAAGTATTTCGAA
TTCCGACACAAACACGTGTCGAGCAGTGTTACAAACTCATTGAACGCCGTGGTTCCTTTT
ACTTCAATTTGACTGCTAAATGGGACTACAATTCAAAGAGATGCATCACCTAAACCGTCC
TCTTCTCATAACTAACATAGCGATTCCCTCTTCTACTGAACCCATCACTACCCCCGAGGA
GCAGATCACTCCTTCTTCTACAGAGCCTTCGACCACTGAAGATCCAACAACAACTCCTGA
GTCGTCCACGATTCCCTCTACCTCTGAGGAGCCCACCAGCACCCCTGAGTCCACCATTGA
GCCTTCTTCCACTCCTGAGACTACAGAGCCTTCCTCAACTGAGTCCTCTTCTACTCCTGT
GACTACAGAGCCTTCCTCTACTGAGCCTTCCTCTACTGAGCCCTCTTCCACTCCTGAGTC
AACTACAGCTCCTTCAACCACCGACGATGTCACCACCACTGACGATGTCACCACCAAACC
TGAGTCCACCACTGAGAAACCAACTACTGATCTCTCTTCTTCTCCTGTGACTACAGAGCC
TTCCTCTACTGAGTCCTCTCCCATTCCTGAGACAACAGAGCCTTCCACCACCCTCGATGT
CACCACCACAAATGAGTCCACCACCCCTAAGTCTACCACTGAGAAACCAACTACTGATCC
CTCTTCTTCTCCTGAGACGACAGAGCCTTCCTCTACTGAGCCCTCTTCCACTCCTGAGAC
TACAGAGCCATCCTCCACTGAGCCCTCTTCTCCTGAGACAACAGAGCCTTCCTCTACTGA
GCCCTCTTCTACTCCCGAGCCCACCACTGAGCAGCTGACAACTGAGCCCTCAACCACCGA
GACAACCACAACTCCTGAGAAACAAACCACTCCACCCTCTTCTACCCCTCAGACAACAGA
CCCTTGTGCGACCACCTCGGTTATTACCTCCACTCCTCCCGTTGGACCTCCCATCACCAC
TACTGTCACCACAAATACTTGTTCTTCGTCTGTCCCTGAGACTTCGATCCCAATCACTTC
AGAGACTTTCACGACAGAGACTCCTTCGACCTCTGAGCCCATCACCACTGATACAGTCAC
TTCTACTGACCCCTGCGAGTCTGTCACTACAATTGTGAGCACACCTCCCTCAGGAGAGCC
TTCCACTTACACCATCACCACTGACATTTGCACTTCCAAGCCTGTGACTCCCATGACCTC
TGTGCCGCAGACTGAGCTCCCCCAGACTTCCGATCCCATTTCGGAGCCTTCCACGCTCAG
CACAACTCCTGGACCTAGTTCCACTGTGTGTGTGACCACTTTGACCACCACTGATCCTGA
TGGAAACCCTTCTACCACCACAGTGACCACAGATTACTGTCCTCATGGCCCTACAACTTA
CACTACAACTGTGACTGTATGTGAGGAAGAATGCACCACTATCCCTATCACTCTCACCAC
CCACGTGCCTCCCAATCCCTCGTCCACCACAGTCATCACCACCATCTCTTCCAAGACCAT
CACTCTGACTGTTCCTTGTGACCCTGAAGAGACCCCTCAGCCTCAGAAGTCTACACCTAC
ACCTGAGATCCCTCAGATAACTACTCCTACATCCGAGATCCCTGAGAAGTCCAGTCCTGT
ACCCGAGGTTCCTGGCAAGCCTACACTGACCAGACCTCTCTTCCCTGTCTACCCTATCAT
CACCATTCCCGTGATCAAGACCGAGACCGTTACTATTTGCGAGGAGGAAGTGTGTAAGAC
TGTGGTGACTACCACTACCGTTTGTGAAGACTGCACTACTCCTGAGGTTCCTGGGCCCAA
ACCCACTCCTGAGGTTCCTGAGCCCAAGCCCACTCCTGAGGTTCCTGGGCCCAAGCCCAC
TCCTGAAGTTCCTGAGCCCAAACCCATTCCTGAGGTTCCTGTGATCCCTGCCGAGCCTGT
CGAACCCACTCCTGAGCAGCCCAAGCCTACCCCTGAGGTTCCAGCGATCCCTGTGCAGCC
CACTCCTGAGCAACCAGAGGTTCCTGTTGCTACCGAGGATCCCGAGGAGCCCAAGGAGCC
CCAGACCCCTAATGAACCTGTTCCTGAGGTCCCTGTGGAGAACATTCCTGAGGTTCCCTC
TAGACCTGAGGTTCCTGAGTTTCCTTCAGAGCCTGTCAAACCTATTGAATCTGTTGTGCC
CACCCCTGAGGTTCCCCAGCAGCCTGTTGAGTCTGCTCCTCAACATACACCCGAGCAGGC
CAACTCTGCTTCTTCAACCAGGTTCTCCATTGCCCTTTTCATGGTCCCCTTTGTCGCTCT
CGTTGTCTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15653g_CDS-001

Protein length: 1052 aa.
Product: Conserved hypothetical protein

>YALI0F15653g_CDS-001 MKPFYLLALQALLVVAKEVASPLTSLDVHTLADNSKEGKFSAQWIWDLDFELNPTADDIQ
SGDYFTFTVDNRASVPSHDFTVKDQNGNDIMQIKNSGNTFTATYTDSVQGKTDLSGDISF
EAPFDKSKLGETAETIIVTVESGSQTLSDTITIDPSIEVSEAHVFGQRKDDMFAWTVRFP
QTPWDRIQFTVTIPDGNSAFKSVKDIKDNMVLELLHDVDEFGNPSGVTPINPYENSDYTS
VTKADPTSFTGRLFNLPKNHPQGEYNVDMSFVSHIEKIAEVYHLEVEWTLWYHANPNEDT
RWTTPGDRTGTAAGAAAYICDACPPEGGGSASVTESIPSSTEPITTPEEQITPSSTEPST
TEDPTTTPESSTIPSTSEEPTSTPESTIEPSSTPETTEPSSTESSSTPVTTEPSSTEPSS
TEPSSTPESTTAPSTTDDVTTTDDVTTKPESTTEKPTTDLSSSPVTTEPSSTESSPIPET
TEPSTTLDVTTTNESTTPKSTTEKPTTDPSSSPETTEPSSTEPSSTPETTEPSSTEPSSP
ETTEPSSTEPSSTPEPTTEQLTTEPSTTETTTTPEKQTTPPSSTPQTTDPCATTSVITST
PPVGPPITTTVTTNTCSSSVPETSIPITSETFTTETPSTSEPITTDTVTSTDPCESVTTI
VSTPPSGEPSTYTITTDICTSKPVTPMTSVPQTELPQTSDPISEPSTLSTTPGPSSTVCV
TTLTTTDPDGNPSTTTVTTDYCPHGPTTYTTTVTVCEEECTTIPITLTTHVPPNPSSTTV
ITTISSKTITLTVPCDPEETPQPQKSTPTPEIPQITTPTSEIPEKSSPVPEVPGKPTLTR
PLFPVYPIITIPVIKTETVTICEEEVCKTVVTTTTVCEDCTTPEVPGPKPTPEVPEPKPT
PEVPGPKPTPEVPEPKPIPEVPVIPAEPVEPTPEQPKPTPEVPAIPVQPTPEQPEVPVAT
EDPEEPKEPQTPNEPVPEVPVENIPEVPSRPEVPEFPSEPVKPIESVVPTPEVPQQPVES
APQHTPEQANSASSTRFSIALFMVPFVALVV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG