YALI0F15389g

Overview

Description highly similar to uniprot|P32381 Saccharomyces cerevisiae YDL029w ARP2 actin-like protein
Locus type CDS
Locus tag YALI0F15389g

Location

Species Yarrowia lipolytica Positions 2076073..2077419
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1347 (nuc.)
Previous locus YALI0F15367g Next locus YALI0F15411g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15389g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15389gYALI0F15389g_mRNA-001YALI0F15389g_CDS-001

Nucleotide sequence

 

>YALI0F15389g
ATGAGCGAACAACCAATTGTGCTAGATCAAGGAACCGGCTTTGTGAAAATCGGCTACGGA
GGCACCAACTTCCCCGAACACACCTTCCCGTCGATGGTGGGTCGGCCCATTCTGCGGGCT
GAAGAGCGGGCCACAGACACATACGGCGACGTGGCCATCAAGGACATTATGTGTGGAGAC
GAGGCTGCCGCGGCACGAAACATGCTGCAGATCTCGTACCCGATGGAGAACGGAGTGATT
CGAAACTGGGAAGACATGGGTCACCTGTGGAACCACTCGTTTTACGACAAGATGAAGATT
GACACCCGGGGTCGAAAGGTGCTGCTCACAGAGCCTCCCATGAACCCCCTCAAGAACCGG
GAAAAGATGTGCGAGATCATGTTTGAGCACTACGGCTTCAATGGCGTTTATGTAGCCATC
CAGGCCGTCCTGGCTCTGTACGCACAGGGCCTGTCGTCAGGAGTGGTGGTGGACTCTGGA
GACGGTGTTACCCACGTGGTGCCTGTCTACGAGTCTGTGGTGCTCAACCACCTGACCCGT
CGTCTGGACGTCGCTGGTCGAGATGTCACCCGACAGCTGATTGCTCTGCTACTGCGACGA
GGATACGCCTTCAACCGAACTGCCGACTTCGAGACCGTGCGACAGATCAAGGAGAAGTTC
TGCTACGTCTCCTACGACCTGGACCTCGACACAAAGCTCGCCAACGAAACCACTGCTCTG
GTCGACACCTACGAACTTCCTGACGGCCGAACCATCAAGCTGGGATCAGAGCGATTCGAG
GCCCCCGAGTGTCTGTTCCAGCCCCATCTGGTCGACTCGGAACAGCCTGGAATCGCCGAG
ACGCTGTTCAACACTATCCAGGCCGCCGACATTGATGTGCGATCGTCGCTGTACAAAGCC
ATTGTGTTGTCTGGAGGTTCGTCCATGTATCCCGGTCTGCCATCCCGAATGGAGAAGGAG
CTCAAGCAGCTGTGGCTCACCCGGGTGCTTAACGGCGACCCCACCCGACTCAACAACTTC
AAGGTCAAAATTGAGGACCCCCCTCGACGACGACATATGGTCTTCCTGGGAGGTGCCGTG
CTTGCTAACATTATGCATGACAAGGAGCACATGTGGATCTCCAAACAAGAGTGGGAGGAG
CAGGGCCCCGCATGCCTGGCCAAGCTTGGTCCCAGATAAGCGGCAACTCCAGCTACAACC
CTGCATTGACAGTATCAACCTAACACTGTCGATGAAGGAACTATGTATGTTATATGATGA
AACGATTGACGAACTGTACTAGCTGTGTAGCAGCGAGTGCAGTGGATGTAGCAGCAGAGC
TACAGAGCGCCCAACTTGCCGCGAGTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15389g_CDS-001

Protein length: 393 aa.
Product: Actin-like protein, putative

>YALI0F15389g_CDS-001 MSEQPIVLDQGTGFVKIGYGGTNFPEHTFPSMVGRPILRAEERATDTYGDVAIKDIMCGD
EAAAARNMLQISYPMENGVIRNWEDMGHLWNHSFYDKMKIDTRGRKVLLTEPPMNPLKNR
EKMCEIMFEHYGFNGVYVAIQAVLALYAQGLSSGVVVDSGDGVTHVVPVYESVVLNHLTR
RLDVAGRDVTRQLIALLLRRGYAFNRTADFETVRQIKEKFCYVSYDLDLDTKLANETTAL
VDTYELPDGRTIKLGSERFEAPECLFQPHLVDSEQPGIAETLFNTIQAADIDVRSSLYKA
IVLSGGSSMYPGLPSRMEKELKQLWLTRVLNGDPTRLNNFKVKIEDPPRRRHMVFLGGAV
LANIMHDKEHMWISKQEWEEQGPACLAKLGPR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG