YALI0F15411g

Overview

Description weakly similar to uniprot|C5JRN0 Ajellomyces dermatitidis zinc/iron transporter
Locus type CDS
Locus tag YALI0F15411g

Location

Species Yarrowia lipolytica Positions 2077703..2079035
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1333 (nuc.)
Previous locus YALI0F15389g Next locus YALI0F15433g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15411g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15411gYALI0F15411g_mRNA-001YALI0F15411g_CDS-001

Nucleotide sequence

 

>YALI0F15411g
ATGTTGGCTTCAGCGGCTGTGGCCTTCTCACCCATCAACGTGCACTCCATCGAGCCTCTG
ATCAACTCCAGTGAGTCGTTGCAAGTTCGAGAGATTCTCAAGGTTGACCGAACCCGACTC
TTGTGTGCCGTTGACGGCGCCGGAAACAAGCGAGCTTGTCTGACTGAGTTCAACAACAAG
AACATCGATGTGTTGGCAGCTTCTCTCAACAATGTTCTGCTTGGAAAACAACTCGAGGCC
CGGTCCGAGGCTTCTTCGAGCTTCTCCGGAGCCGGAAGAAACAGCGACGAGGAATTGGAC
TGTTCCTTCGAGCCTCGAGATCTCAAAAAGCCCATTCGAATCGGCGCTCTTTTTGCCGTT
CTGGCCACCTCGGCCCTTGGTGTTTTCCCTCCCGTTTTGGCCACCTCTGTGTTCAAAATC
AACCTCCAGTCGCTCCCCATGACCTTCGTCAAGCAGTTTGGAACTGGAGTGGTTCTGAGT
ACCGCATATGTGCATCTGGCAGCTGAGAGTCAGGAGGACTTCACCAACGAGTGTCTTGGA
GACCTTAGCTACGATCCCACTGCCATGTCTCTTGCGTTGGCTGGTACTTTCATTGCCTTT
GTGCTTGAATACGGCTCTGCCAGATGGCTCCGAGCCCGTCATGAGCGAAAGAAGCCCAAC
CACTCCAGTGAATCGGACGATTGCGACAAGGACCAGGTCAAGGGTGCCGTGGACGTAATT
GAAACCCAGATCGACATGTCTGGAGCCGCCAACATGGGCTGTGCTGCTCACAACGCCACT
CTGATTGATCCTAACGATAAGATCTCCGTCATTATCATGGAGGGAGGCATCATTTTCCAT
TCTGTTCTTGTCGGCGTTGCAGTCACAATTGCCGACGATGACGGCTTCATTTCTCTGTTC
ATCGCCATTCTGTTCCACCAGGCGTTCGAAGGTATCGGCCTTGGGTCTCGAATCGCCGGA
CTTCGTGACTCGTCTCTGTTCTTCAAAATGAGCATGTGCACCTATTTCACCATCATCACT
CCCATCGGCATGGCTATTGGTCTCGGTGTCATGGACTCCATGAACTCCAACGACCCTGCC
ACCATTTGGGCCATTGGAACCATCTCGGCTCTGTCTGCTGGCGTGCTCATTTGGGCTGGA
GTTGTGGAGATGTTGGCGTTCGACTGGCTGTTTGGAGATCTTTCTTTTGCACCCAAAAAG
CGAGTCTTTTTCGCAATGTCGGGTCTGGTTGGAGGCATGATTTGTATGTCCCTCATCGGA
AAGTGGGCCTAGTCCTTGCCAAAGGCGATATAATGATTAATGAATAGATAATACGATTTT
ATGAGTTGAGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15411g_CDS-001

Protein length: 424 aa.
Product: Conserved hypothetical protein

>YALI0F15411g_CDS-001 MLASAAVAFSPINVHSIEPLINSSESLQVREILKVDRTRLLCAVDGAGNKRACLTEFNNK
NIDVLAASLNNVLLGKQLEARSEASSSFSGAGRNSDEELDCSFEPRDLKKPIRIGALFAV
LATSALGVFPPVLATSVFKINLQSLPMTFVKQFGTGVVLSTAYVHLAAESQEDFTNECLG
DLSYDPTAMSLALAGTFIAFVLEYGSARWLRARHERKKPNHSSESDDCDKDQVKGAVDVI
ETQIDMSGAANMGCAAHNATLIDPNDKISVIIMEGGIIFHSVLVGVAVTIADDDGFISLF
IAILFHQAFEGIGLGSRIAGLRDSSLFFKMSMCTYFTIITPIGMAIGLGVMDSMNSNDPA
TIWAIGTISALSAGVLIWAGVVEMLAFDWLFGDLSFAPKKRVFFAMSGLVGGMICMSLIG
KWA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG