YALI0F15367g

Overview

Description some similarities with uniprot|P39944 Saccharomyces cerevisiae YER144C (ohnolog of YDR069C) UBP5 ubiquitin- specific protease
Locus type CDS
Locus tag YALI0F15367g

Location

Species Yarrowia lipolytica Positions 2071963..2075048
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3086 (nuc.)
Previous locus YALI0F15345g Next locus YALI0F15389g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15367g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15367gYALI0F15367g_mRNA-001YALI0F15367g_CDS-001

Nucleotide sequence

 

>YALI0F15367g
ATGTCTTCTGCTGTGCACTACGCCGCTTTGTCCCCTCACCGAGGGTGTGGTTTGTCATTG
TCACCTCAACTTCGTGATGATGTGTCGCACTGTGCCACACAAGGCGGAGCTAAACCTAAT
AACCATGGCCAACCACACACAAACCACCACTTCCAGCTCAACCGCACACCAGTTGTACCC
ATGCGATACACCAATCTAGAAGAGCTGGGGAAGGCCGCGAGGCAGGCAACAGGGGCCGTG
TCGGGCTTCAAGCCCAAGCGCATGGTCGATCTGGCACTATCTCAGATAGAGCAGTACAAG
CAGATGTTGGAGATGGACCTGGAGCTGGCAGCCTACCACATATTCCAGGCCCGCGAGATT
CTGTTTGTGTGCATCCCTCGCCACCCGGACTACGATAAATTCCAGGCCAAGAAGGGCCCT
TTCCACGAGACGTACGTGGAGCTGTGTGACCTGGCCGAAACCGACAGACGGGTGCTGGAG
CTCATCTCCACTGTCAAGGGCAAGTATGTGCGGGAAAAGACATCGGGTGTGCGACGACAG
TCCAACGACGACCTGCTGCAATCCATCGACGACACTATACGAGGCTTTTCGCATCTCGAC
GTCCAACAACAGTCTGCCCCCCCCACAGAGACTGATCCACTCAAAGACAAGCTGGAGAAA
CTGCGTGGTAGGAGCCCCGAGGTGCAGCGGGCTACATTGACGACCAACGGCAGCAGCACC
ACCACCACGAAAAACGGTGTCATGCCCCCACCGAAGATATCGCCACCGCCCGTTCCAGTG
CCGCAAAACGGAGGCTACGTACGACAGTCATATGTGGGCCCTGCATCTGTGCCCTCCCCA
CCGCCCCATTCAGTGACTCCGCCCACACCGCCACGTCACACTATCACGCTCAAGGCGCCG
CAGCTGATCTCGTACCTTGGACACGCTCCCGAGACTCTGCTGCTGCTCGACATTAGACCC
CGAGCAGACTTCCAGAAATGCCATATTGCCGCTCCCAACGTTGTGTGTGTGGAACCGCAC
CTGCTGGAAGCAGACATGACAGATGAGCAAGTGGAGGAGAAAATGCTGGCTGCACTGACG
ACGGAGGAGTTTGAGCGGTTCATGGCCCGATCGGCGTTTGAAATCGTTGTCTTCTACGAC
CAGAACAGTACAAGCTACCAGACCCGTCCGCTGAAAATTCTGCTCAAGGCGCTCTACAGC
CAGGCGTTCAAGCGGCCTCTTCAACGCCCTCCATGTCTGCTGGTTGGAGGTCTGGACGAG
TGGAGACACTCAGGAGCTGCCACATCTTTCATTGACACCCGGTCCCCTCTACAGCAAAGG
GCAGAGCTGGCACGAACACAAACGGATCCTACCCCCGTGGCGTCCTACGACCCCAACAGA
GTCTATTCGCACCCCTACGCCAGCAACTACGCCAGCTATGCGTACTCATATGGTCCTAAC
CAGTCATCCCCAACTCCCCCTCCAGTACCAACCACCCCGCCTCCGAAACCCCCCTCTGCA
ATGTCGTCTTCGTCGTCGCTCAACCTCCCACAATCAATGGCCCTATCTTCATCCACGTCG
TTGCCGGATCCCAGCTCGTACAAAAATCAAATGTACTCATGTCATCCGTATCTCAACGAG
CCCCTACCGGAGTCCAGGCACCACACACACGGCGTATCTCAGCCCGCCCAGGCTGCCCGG
TCTTCGCATGGCTATTACTCCCATGCTCTTCCTCAGTTGTCGGTGAATACGGCCTCTTCA
CCGATCAAACAGCCGCCCAGTGCTTATTCGCCAAAAGAAAAACACAATGGCGAGTTCCCC
AGTTACAAGAGTGTGCGCCAGCCTATCCCACAGTCGCCGTACCTGCCCCATCTTGCACCC
ATGTCCGGATCGCCTCCCCCCATGTCTCTGACCTTTACCACAGGTCTCAAGAACCTCGGA
AACACCTGCTATATCAACTGCATCATCCAGTGTCTTGCCACATCGCAGCTGACCAAGATC
ATTGTGAATCAGGCATACAAGCATCGAGTCAACATGAAGTCAAAGCTGGGATACAAGGGA
GCTTTGATTGCCAAGTATGCTGATCTCGTGCAGGCTCTAGTGGCGAACGCTTACCCTTAC
TTGGTCCCCACTTCCTTCAAAGGAATCATTGCACATGTCAACTCTCAGTTCAGCGGCATG
GAGCAGCATGACTGTCAGGAATTTTTGACTTTCATTCTTGATGGCCTGCATGAGGAGCTC
AACTCTGTGGGCGATGGTCAATACAAGCCCCGTGAGCTGACCGAGAGCGAGGAGAAGCGA
CGAGAGGAGATGAGTGTTCGAATTGTGTCATCTCTGGAGTGGGAGCGGTACCTCAAGTCC
GCGTCTTCGTTTATTGTCGACGAATTTCAGGGCCAGTACCAATCAAAGCTCCAGTGTACT
GTGTGCAAAATGACGTCGACGACATACACTGCATTCTCGTCGCTAACTCTGCCCATCCCC
AAGTACGCTGGGGCCACTCTCCCAACGCTGTACGACTGCTTCAACCAGTTTACGCAGCCG
GAGTTGCTGGAGGGCGAAAACATGTGGCAGTGCCCTACGTGCAAGAAGCCGCGGCCCACT
ATCAAGTCTATGAAGATCTCGCGGCTTCCAGAAACTTTGATCATCCATCTCAAGCGGTTC
GACCACTCACGGGGCTATGGAGACAAGCTCAACACGTTTGTTACGTACCCTCTGGAGATG
GATCTCACGCGGTATTGGCCTCCGCCCACATCGGAGGACGAGCCCTTCTTGAAGAAGCTG
CTTCCTCGTGGCCAGACGGCTCCTTTCCGGTACTCACTGTTTGGAGTGGCCAACCATTAC
GGAACGCTGCGCGGGGGTCATTACACGTCGTTCTGCAAGCGTGGCAAGCTCGGATGGTGC
TACTTTGACGATACGGTGGTGAACAGAAACGTGAACGAGCGAGCCGTTGTTAACAAGAAT
GCGTATGTGTTGTTCTACCAGCGCCGGCACAATCCTTAGACTTCTCAGAGACACGGTAGG
CGATATACAATGAGGGGACGAAAAGCATCTTGAAAAATATGCATATAGCTATTTATATAA
CGAATTATGATTGCATGATAACATGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15367g_CDS-001

Protein length: 993 aa.
Product: Conserved hypothetical protein

>YALI0F15367g_CDS-001 MSSAVHYAALSPHRGCGLSLSPQLRDDVSHCATQGGAKPNNHGQPHTNHHFQLNRTPVVP
MRYTNLEELGKAARQATGAVSGFKPKRMVDLALSQIEQYKQMLEMDLELAAYHIFQAREI
LFVCIPRHPDYDKFQAKKGPFHETYVELCDLAETDRRVLELISTVKGKYVREKTSGVRRQ
SNDDLLQSIDDTIRGFSHLDVQQQSAPPTETDPLKDKLEKLRGRSPEVQRATLTTNGSST
TTTKNGVMPPPKISPPPVPVPQNGGYVRQSYVGPASVPSPPPHSVTPPTPPRHTITLKAP
QLISYLGHAPETLLLLDIRPRADFQKCHIAAPNVVCVEPHLLEADMTDEQVEEKMLAALT
TEEFERFMARSAFEIVVFYDQNSTSYQTRPLKILLKALYSQAFKRPLQRPPCLLVGGLDE
WRHSGAATSFIDTRSPLQQRAELARTQTDPTPVASYDPNRVYSHPYASNYASYAYSYGPN
QSSPTPPPVPTTPPPKPPSAMSSSSSLNLPQSMALSSSTSLPDPSSYKNQMYSCHPYLNE
PLPESRHHTHGVSQPAQAARSSHGYYSHALPQLSVNTASSPIKQPPSAYSPKEKHNGEFP
SYKSVRQPIPQSPYLPHLAPMSGSPPPMSLTFTTGLKNLGNTCYINCIIQCLATSQLTKI
IVNQAYKHRVNMKSKLGYKGALIAKYADLVQALVANAYPYLVPTSFKGIIAHVNSQFSGM
EQHDCQEFLTFILDGLHEELNSVGDGQYKPRELTESEEKRREEMSVRIVSSLEWERYLKS
ASSFIVDEFQGQYQSKLQCTVCKMTSTTYTAFSSLTLPIPKYAGATLPTLYDCFNQFTQP
ELLEGENMWQCPTCKKPRPTIKSMKISRLPETLIIHLKRFDHSRGYGDKLNTFVTYPLEM
DLTRYWPPPTSEDEPFLKKLLPRGQTAPFRYSLFGVANHYGTLRGGHYTSFCKRGKLGWC
YFDDTVVNRNVNERAVVNKNAYVLFYQRRHNP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG