YALI0F15345g

Overview

Description similar to uniprot|P40970 Saccharomyces cerevisiae YDR062w LCB2 serine C-palmitoyltransferase subunit
Locus type CDS
Locus tag YALI0F15345g

Location

Species Yarrowia lipolytica Positions 2068653..2070332
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1680 (nuc.)
Previous locus YALI0F15323g Next locus YALI0F15367g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15345g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15345gYALI0F15345g_mRNA-001YALI0F15345g_CDS-001

Nucleotide sequence

 

>YALI0F15345g
ATGGCCTGCGAAACACAGCTGCTGGAAAAGGAGTTTGGTCGACTAACGTCGCCGGAGTAC
AAGTACAAGCAGAAGGTGCAGCCCAGCGAAAAAATCCGCCATGTCGAAGAAGAGGAGCCG
GCCTACTACATGCTGCTGCTCACCTACCTGGGGTATCTGATTATGATTGTGTGTGGCCAC
GTGCAGGACTACTACGCCAAGGTGTTCCATCCCGAGACGGTGGCAGACTTCATGGCCAAG
GACGGCTATGCGCCGCTGTTTTCCGACTTTGAGTCCTTCTACATCCGACGTCTGCAGAAG
CGACTGCGAGACTGTTTCGGCCGAGTGGTCACGGGCGTCCCCGGACGATACATCACCGTG
CTGGACCGAGTCTCTAACGACTACAACACCACCTACAAGTACCTGGGCACCTCCACCGAC
TGTCTCAACCTGTCGTCGTACAACTACCTTGGATTTGCCCAGTCCTCAGGCCAGTGCACA
GACGCAGCCGAGGTTAGCATCAACACAGAGGGAATCTCGTCCTTTGGCACCCGAGCCGTC
TGCGGCACTCTGGACGCACACGTCAAGACCGAAAAGCGTGTTGCCGAGTTTCTGGGTAAG
GAGGACGCTCTCGTCTACTCCATGGGCTACGGCACCAACGCCTCGGTCTTCTCGTCGCTC
GTCGACAAGCACTGTCTAGTGCTCTCTGACGCGCTCAACCACGGATCCATTCGATACGGC
GCCCGTCTCTCTGGTGCCGTCATTAAAATCTTCAAACACAATGACACCAAGGACCTGGAA
CGAGTCCTGCGAGAACAGATTTCGCAAGGCCAGCCCAAGACCCACCGACCCTGGAAAAAG
ATTCTCGTTGCCGTCGAGGGTCTGTACTCCATGGAGGGAACCATGACCGATCTGCCCACC
ATGTGCGATCTACGAGACAAATACAAGTTCTACCTGTTTGTGGACGAAGCACACTCCATC
GGAGCTCTGGGACCGCGAGGCAGAGGTATCTGCGACTACCTGGCCGTCGACCCCGCACGT
GTGGACATCCTCATGGGCACCTTCACCAAGTCGTTTGGCGCCACAGGAGGTTACATTGCG
TCGTCGCACGAGCTAATCAACCACCTGCGGGTCAACAACATGGGCAACGTGTACGCAGAG
TCCGTGTCACCACCCGTTCTCGCACAGATCACAGCTGCCCTGCAGACGATTGACGGCGAG
ATTCGGCCTGGTGAGGGAGAGGAGCGTCTGGAACGTATCGCATTCAACTCGCGGTATCTC
CGTCTGGCGCTCAAGCGGCTCGGTTTCATTGTCTACGGCATTGACGACTCGCCCATCATT
CCGGTGCTCCTGTACGTGCCGGCCAAAATGCCTGAAATGGGCCGAATTCTGTTGAAGATG
GGCATTGCCGTGGTGGTGGTGGGTTACCCTGCAACAGACATTGCGTCGTCACGGGCCCGG
TTTTGCATGAGTGCCGCGCTGACCAAGGAAGATCTGGACCGAATCATTAAGGTCATGTGG
CAGCTCGGCAACATTCTGTCCTTCAAGTATGGCAAGGGAATGCCTGATGCCAACGGCAAG
GTGCGACATTGGGAGCTCAGCGAGGTTTTGGCCTCGGGCGTGGAGGACTGTAAGAAGGAT
TGGTAAGATATAGTAAATGTGCATATAGTTGGCAGTAATAATACGTGTGCATGTGTATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15345g_CDS-001

Protein length: 542 aa.
Product: Component of serine palmitoyltransferase, putative

>YALI0F15345g_CDS-001 MACETQLLEKEFGRLTSPEYKYKQKVQPSEKIRHVEEEEPAYYMLLLTYLGYLIMIVCGH
VQDYYAKVFHPETVADFMAKDGYAPLFSDFESFYIRRLQKRLRDCFGRVVTGVPGRYITV
LDRVSNDYNTTYKYLGTSTDCLNLSSYNYLGFAQSSGQCTDAAEVSINTEGISSFGTRAV
CGTLDAHVKTEKRVAEFLGKEDALVYSMGYGTNASVFSSLVDKHCLVLSDALNHGSIRYG
ARLSGAVIKIFKHNDTKDLERVLREQISQGQPKTHRPWKKILVAVEGLYSMEGTMTDLPT
MCDLRDKYKFYLFVDEAHSIGALGPRGRGICDYLAVDPARVDILMGTFTKSFGATGGYIA
SSHELINHLRVNNMGNVYAESVSPPVLAQITAALQTIDGEIRPGEGEERLERIAFNSRYL
RLALKRLGFIVYGIDDSPIIPVLLYVPAKMPEMGRILLKMGIAVVVVGYPATDIASSRAR
FCMSAALTKEDLDRIIKVMWQLGNILSFKYGKGMPDANGKVRHWELSEVLASGVEDCKKD
W*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG