YALI0F13937g

Overview

Description highly similar to uniprot|O93968 Candida boidinii Formate dehydrogenase
Locus type CDS
Locus tag YALI0F13937g

Location

Species Yarrowia lipolytica Positions 1877868..1879002
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1135 (nuc.)
Previous locus YALI0F13893r Next locus YALI0F13959g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13937g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13937gYALI0F13937g_mRNA-001YALI0F13937g_CDS-001

Nucleotide sequence

 

>YALI0F13937g
ATGAAGGTCCTTCTTATTCTCTATGATGCCGGCTCTCACGCTAAGGATGAGCCCAAGCTC
CTTGGATGCACCGAGAACGAGCTCGGTATCCGAGACTGGCTCGAGTCTCAGGGCCATACT
CTCGTTACCACCTCTTCCAAGGATGGCGCCGACTCTGTGCTTGACAAGGAGATTGTTGAC
GCCGATGTAGTCATCACTACCCCCTTCCACCCTGGCTACATCAACAAGGAGCGAATCGAC
AAGGCCAAGAAGCTCAAGATCTGCATCACTGCCGGTGTGGGCTCGGACCACGTTGATCTC
GATGCTGCCAACGCTCGAGATATCGCTGTTCTGGAAGTCACTGGTTCTAATGTCCAGTCC
GTCGCTGAGCATGTTGTCATGACTATGCTCGTTCTGGTCCGAAACTTTGTCCCCGCCCAC
GAGCAAATCATCTCTGGCGGCTGGGATGTTGCTGCTGTCGCCAAGGACTCCTACGATCTC
GAGGGTAAGGTCATCGGTACCGTTGGTGGCGGCCGAATCGGCCAGCGTGTCCTCAAGCGA
TGCAAGCCCTTCGACCCCATGGAAATGCTCTACTACGACTACCAGCCCATGCCTGCCGAC
GTCGAAAAGGAGATTGGTTGCCGACGAGTTGAGTCTCTGGAGGAGATGCTCTCTCTGTGT
GATGTCGTGACCATCAATTGCCCTCTGCACGCCTCCACCAAGGGCCTCTTCAACAAGGAG
CTCATCTCGCACATGAAGAATGGTGCTTGGCTCGTCAACACTGCTCGAGGAGCCATCTGC
GTTACCGAGGACATTGTCGAGGCACTCGAGTCCGGCAAGATGCGAGGATACGGTGGTGAT
GTCTGGTTCCCCCAGCCTGCCCCCAAGGACCATCCCTGGAGAACCATGCGAAACAAGTAC
GGTGGTGGAAACGCCATGACTCCTCATATCTCTGGCACTTCCATCGATGCCCAGGGCCGA
TACGCCGAGGGAACAAAGAAGATCCTCGAGGTCTTCTTCTCTGGCAAGCAGGATTACCGA
CCCCAGGACATTATCTGCATCAACGGTCACTACGGTACCAAGGCTTACGGTGACGACAAG
GAGCACAAGGAGCACCAGCTTAAGTAAACATTTTTATAGTAACATCTCATTTTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13937g_CDS-001

Protein length: 369 aa.
Product: Formate dehydrogenase, putative

>YALI0F13937g_CDS-001 MKVLLILYDAGSHAKDEPKLLGCTENELGIRDWLESQGHTLVTTSSKDGADSVLDKEIVD
ADVVITTPFHPGYINKERIDKAKKLKICITAGVGSDHVDLDAANARDIAVLEVTGSNVQS
VAEHVVMTMLVLVRNFVPAHEQIISGGWDVAAVAKDSYDLEGKVIGTVGGGRIGQRVLKR
CKPFDPMEMLYYDYQPMPADVEKEIGCRRVESLEEMLSLCDVVTINCPLHASTKGLFNKE
LISHMKNGAWLVNTARGAICVTEDIVEALESGKMRGYGGDVWFPQPAPKDHPWRTMRNKY
GGGNAMTPHISGTSIDAQGRYAEGTKKILEVFFSGKQDYRPQDIICINGHYGTKAYGDDK
EHKEHQLK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG