YALI0F13959g

Overview

Description similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2 Oligopeptide transporter
Locus type CDS
Locus tag YALI0F13959g

Location

Species Yarrowia lipolytica Positions 1881552..1884237
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2686 (nuc.)
Previous locus YALI0F13937g Next locus YALI0F13964r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13959g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13959gYALI0F13959g_mRNA-001YALI0F13959g_CDS-001

Nucleotide sequence

 

>YALI0F13959g
ATGGACTCTCCCACCGAGGAAAAGTTCAACGACAAAAAGTCCCCCTTTGAGAAGGACGCC
ATCGAGGTGGACTTCGAGGCTGCTGAGGTCACCGATATCTCTTTCGTTGATTACGTCGGC
GAAAAGCTCAATTTTGTCCCTGACGAAAATGGCGAACACACCAAGAATGTTCGTCTCATG
GCCAGTTTTGTCGCTGAGATGACCGAGGAAGAAGCTGAGGAAATTCTTCTCAAGTTCATC
CCCCTCCACGAAGATGATTACAATCTGCGGTTGGAGCAAAAGGAATATCTGAAGTCGCTT
GTGAAAGGCGAGAAAGAAGCACCTGACCCCACAACCTACTCTATGGATCTCCGAATCGAA
GCTGCTGCCATCAAGCATTGGTCGCCTTACGTCGAAGTTCGAGCCGTTACCGATTGTTGG
GATGATATGGACGAACCTTGCGAGACAATCAGATCTTATGCCATCGGCTTGGTCTGGCTT
CTTGTCGGATGCTTCGTGAACCAGTTCTTCATCTTCCGCTTCCCTTCCATCTCCATTAGC
TCCGACGTCCTGCAGCTGCTCACCTATCCATGTGGAGAGTTCCTGGCTCGAGTTTTGCCC
GACTGGGGGTTTACTTTCCGAGGAACCCGAATCACTCTCAACCCTGGTCCTTGGACAAGA
AAGGAGCAGATGTTTGCGACCTTCTTCCTCAGCGGTGGTGATGGTTCCACTTATGTGTCG
GCCTACAACCTCCCCACCCAGCTCCTGCCCATGTACTACGATCAGAAATGGGCCACCTTT
GGTTACCAGATTATGTTGACCCTTTCTTCTCAGTACATTGGTTTTGGATTCGCTGGTATC
CTGCGACGATTTGCCATCTACCCTACCAAGGCAATGTGGCCTATGCAAATGCCCACTCTG
GCGCTCAACCGAGCCCTACTGGATCCCGAGAGGAAGCAGAGCATCAACGGATGGACCATT
AGCAAGTATTGGTTCTTCCTGGTGGTGTTTGCAGGCTCATTCGTCTACTATTGGATTCCC
GACTACCTGTTTGCAGCTCTCAGTAACTTCAACTGGATGACATGGATAGCTCCCAACAAT
GTAAACCTGGCTCTTCTCACTGGGCAGTCTGGAATGGGTATAAACCCCATCCCCACCTTT
GATCTTAACGTCATTGGCGTGGGTAACGTCGTCACTCCGTGGTGGTCAGTTGTTAACATT
CTTGTGGGAGCTATTCTAGGAACCTTTACAATCATTGGTGTATACTGGTCCAACATCAGA
TGGACCGCCTATCTGCCTATGAACACTCCTGGAATCTTCAACAACAAAGGAGGTAGCTAC
AAGGTGACCAAGATCCTGACTAATGGTGTTTTTGACGAGGAGAAGTACCAGAAGTATGGT
CCTCCACTGTGGGGAGCTGCTAACCTGGTACTCTACGGTTCTTTCTTTTCTCTCTACACC
CTTGGCTTTGTTTACACCATGCTGGCTTACTGGAGAGATATGTGCACAGCTGCCGTGGAC
TTTTACAACGGTATTGCCTTCTGGAACGGACGAAAGCGAACCGAGGTTGACTCTCCTTTT
GCCCGACAGCTCAAAAAGTACCCCGATGTCCCTGATTGGTGGTTCTTTCTTATTCTTCTC
ATCTCCATTGGCTTCTGCATTGGCACTGTCAAGGGCTGGCCCACTTCCACTCCTGTCTGG
GGTATCTTCTTTGTTCTCGGCATCAACGTGGTCTTCCTAGTCCCTATCTGTCTCCTTCAA
GCTTACACTGGTAACGGATTTGCCCTCAACGTGCTTGTGGAGATTATTTGTGGCTATGCT
CTCAACGGACGACCTACTGCACTCAACATTTTAAAGGCATACGGAGTCAACGTAGACTCC
ACCTCTCAGGGCTTTGTGTCTGTGTGGAAGACTGGAATGTACGCCTACGTGCCTTCTCGG
GCCATTTTCCGAACCCAGATCCTCTCCACCCTCATCAATGCGTTTGTCACCGTCGGAATT
CTCCAGTACCAGCTCACCTTGACAGATATTTGCACCCCGGCCCAGCGAGCTACTACCAAG
TTTACTTGCCCCAACCAGAACGTCTTCTACTCTGCATCGGTTCTATTTGGAGCTATCGGA
TCCAAGCGAGTTTTTGGAACCGGGGGAGGGGATGGCCTTTACCCCTTCCTTAAGTGGTGT
TTCCTCATTGGAGCAGTTGTTGCTCTCATTTTCTTCGCCATTCAGTACACCATTCCGGCC
TACATTGGCAAGCGGTACCCCGAGAGAAAGGAGGCCATGGTTCGACTCTCGGAGCGACTT
GGAAAGATTAACCCCGTTGTTATCAACATGGGCTTCCTTCAGTTCGCTCCTGGCAACCTA
TCATACATTACTGGAGGTGTTTATCTGGCAGCATTTTGGACTCTGTACTTGAAGAAGAGA
TACACTGAGTGGTGGGCCAAGTACACCTATGTGATGGTTGCAGGTGTCAATGTCGGTATC
GCCCTGGCAGCAATCATTGTGTTCTTTGCCCTCCAATACAGCGACATTGAGCTCAGTTGG
TGGGGAAACAATGTGCCTTACGCTGGTGCCGATGGTAATGAAACTCCCTTATTGACATTG
GCTCCAGGCCAACTTATTGGTCCTCAGCCCGGTCACTTCCCTTAGGGAGGTTTTTCAGAT
TCATATTTATCTAATGAAGTGCTTAATGAATAGTAACGTAACTAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13959g_CDS-001

Protein length: 875 aa.
Product: Oligopeptide transporter, putative

>YALI0F13959g_CDS-001 MDSPTEEKFNDKKSPFEKDAIEVDFEAAEVTDISFVDYVGEKLNFVPDENGEHTKNVRLM
ASFVAEMTEEEAEEILLKFIPLHEDDYNLRLEQKEYLKSLVKGEKEAPDPTTYSMDLRIE
AAAIKHWSPYVEVRAVTDCWDDMDEPCETIRSYAIGLVWLLVGCFVNQFFIFRFPSISIS
SDVLQLLTYPCGEFLARVLPDWGFTFRGTRITLNPGPWTRKEQMFATFFLSGGDGSTYVS
AYNLPTQLLPMYYDQKWATFGYQIMLTLSSQYIGFGFAGILRRFAIYPTKAMWPMQMPTL
ALNRALLDPERKQSINGWTISKYWFFLVVFAGSFVYYWIPDYLFAALSNFNWMTWIAPNN
VNLALLTGQSGMGINPIPTFDLNVIGVGNVVTPWWSVVNILVGAILGTFTIIGVYWSNIR
WTAYLPMNTPGIFNNKGGSYKVTKILTNGVFDEEKYQKYGPPLWGAANLVLYGSFFSLYT
LGFVYTMLAYWRDMCTAAVDFYNGIAFWNGRKRTEVDSPFARQLKKYPDVPDWWFFLILL
ISIGFCIGTVKGWPTSTPVWGIFFVLGINVVFLVPICLLQAYTGNGFALNVLVEIICGYA
LNGRPTALNILKAYGVNVDSTSQGFVSVWKTGMYAYVPSRAIFRTQILSTLINAFVTVGI
LQYQLTLTDICTPAQRATTKFTCPNQNVFYSASVLFGAIGSKRVFGTGGGDGLYPFLKWC
FLIGAVVALIFFAIQYTIPAYIGKRYPERKEAMVRLSERLGKINPVVINMGFLQFAPGNL
SYITGGVYLAAFWTLYLKKRYTEWWAKYTYVMVAGVNVGIALAAIIVFFALQYSDIELSW
WGNNVPYAGADGNETPLLTLAPGQLIGPQPGHFP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG