YALI0F13717g

Overview

Description similar to uniprot|P24276 Saccharomyces cerevisiae YDR293c SSD1 involved in the tolerance to high concentration of Ca2
Locus type CDS
Locus tag YALI0F13717g

Location

Species Yarrowia lipolytica Positions 1843102..1846868
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3767 (nuc.)
Previous locus YALI0F13695g Next locus YALI0F13739g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13717g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13717gYALI0F13717g_mRNA-001YALI0F13717g_CDS-001

Nucleotide sequence

 

>YALI0F13717g
ATGAGTGGTAACAACAATGGCAGCAACAACAATGGCAACAACGCCAATGGCAACCAAAAC
CTGCTGCCCAACCCGTCTAGCAGGGGCCCTCGAAACCTGCACATTGCCCACAGACGATCG
CCCTCTGAGCTGACCCCCTTGATGGGTGAGTATCATCATAACTGCTGACACACAGCCGTG
TCAGACATGCCGGCCCACAAACTAACACAGTCGAACAAATCGCATTACAACAACAAATCG
ATATCTTGCAGGCCCAGCAGCAGCAAATTCTGGCCCAGCAGCAGCAGTTCATCCACCAGC
CCAACCTGATGCCCCCTCCGCCAATGCAGCAGTCTTACGTCACTGCCACAGGTCCCTTTG
GCCAATTTGGCGTCCAGCCAGTCCACCAGATGGGCCCTCCTCAGAGCGGAGGCCACCGAC
GGGCCCAATCTTCTTCCCACCCCAACCAGCATCAGCAGCAGCCGCAGCAGCATTTCCAGG
GTGGCCACCAATCCACCCCCTCCCAGAGCGGCGGAGGAGACAGAGGCCACAACCGACGAC
AGTCCCTCGGTCTGCCTGAGGCTATCCGAGCAGCTGCTATTGAGCAGCAGAAGCGGCAGG
GAGGAGCAGGGGCCGTGCCGGCCTCGCCGCAGCGAAACCACTCATCTGGTTCCAATTCAT
CCAACCCTGGATCTTTCAAGTTCCCCCCCACTGCCGACGACTCCTCGCCCACCAAGTCGC
ATTCGCGATCTCGATCAATGGCCTTTGGCCAGCAGAAGCGAAATCAGTCGCCATCTCGAT
TCCAGTTCCCCGCCGGTGGACATGGATCGTCACCTTCCACCGGAGGCAACTTCCACCCTG
GCCACGGACACTCGCGATCCAACTCTCGAAACTTCGACCAGGGAGGATTTGTTCCCGGCC
ACCGACACAGAGGCTCCTCTGTGTCCTCCATGCATGCCTTCAACAGCTACGGCGGCGGCC
AGCAGCAGCGAAAGTCGCTGTTTGCTCCATACCTCCCCCAGGCGTCTCTTGGTCAGCTCA
TGGACCAGGGCCGTCTGGTGAGCGGTGTGTTGCGGGTTAATAAGAAGAACCGATCCGACG
CGTACGTGTCCACCGACGGAATTTTGGACGCCGACATTTTTATCTGTGGCTCCAAGGACC
GAAACAGAGCACTCGAGGGAGACTTGGTTGCTGTCGAGCTGCTCAACGTCGACCAAGTTT
GGGACTCCAAACGCGAGAAGGAGGAGAAGAAGAAGCGAAAGGACCAGACAACCGGCGATA
TTTCAGACACCGTTGAGACTACTTCCGGCGGAGCCAACAACTCGGGAGGCCTCCAGCGAC
GAGGATCTCTCAAGCAGAGACCTCAGCAGAAGCGAAATGACGACGTTGAGGTCGAGGGCC
AGTCCCTGCTGTTGTCCGAGGAGGAGGAGCTTACCGACGCTGCCAAGCCTCTCTACGCCG
GCCACATTGTCGCTGTCATTGAGCGAGTACCTGGCCAGCTGTTCTCTGGTACACTTGGTC
TGTTGCGACCTTCGTCCCAGGCCACAAAGGACCGTCAGGAACGAGAGGGAGGACACAACA
ACAACAACAACAACCAGCATCAAGAGCCTCCCCGACCCAAGATTGTGTGGTTCAAGCCTA
CCGACAAGCGGGTGCCTCTAATTGCCATCCCCACTGAGCAGGCCCCCAAGGACTTTGTTG
AGAACCATGAGTCTTACGCAAACACCCTGTTTGCCGCCTCCATCAAGCGATGGCCCATCA
CCTCTCTGCATCCCTTTGGTACCCTCGTTGAGGAGATTGGCGATGCGAACGATGATGAGA
TCCAGATCGAGGCCATTCTGCGAGACAACAACTTCACCGCCGATGTATTCCCCGACTCGG
CACTCCGAGCAGTTCCCGAAGAGACTGCCACAGGCACACCTCTCACCGATGAGGAGACTG
AAGGCCGACGGGACTTCACTGAAGAGTACACTCTGGGTCTGTCGCCCAACGGTATTCTAG
CCGATCAGGCCTTCCATATCAAGAAGCTTGGCGATGACAAGATTGAACTGGGTGTGCACG
TGTTGGACGTGACTCACTACGTGCAGTCCAACAGCGCTCTCGACCGAGAGGCCAAGAAGC
GAGGCTCGTCTTGTTTCTTGGTGCAGCGGGATCTGAACATGTTCCCCGACAACTTCAACT
CCAATTTTGCGCTGACCCCAGGTAACAACCGGCTGACCATCTCCGTGGTGTTTGAGATCG
ATGCCACCACCTTCGATGTGTCGGACACCTGGATCGGCACCTCATACATCAATACCAAGC
AGAAGCTTGACTACGCCACCGTGGAGCGAATTTTCGACGACAAGGGCGGCGACGACAAGG
CTCAGATCCAGGCCATTCTCGCCGAGGGTCTGCTGAGCCAGACCGACATTGACTATGTCA
AGACCCTGCGTCTGCTGTCGATGGAGTTCAAGCGGGACCGATTCAACTGCAAGAACCTCA
ACCTTGGCGGCAAGGACCTTCCTGCGCTTTCTCTGCTTAACCAGATCGACGACGAGAACC
TGCCCATCTCTACCGACATCTACCAGGCTCTTCAGATCTCCCACATTGTGGACGAGGTTA
ACATCAAGGTCAACTGTGCCGTGGCCCAGAAGCTGTATGCTTCTCTGGGTCCCAAGGCCT
TCCTGCGACGACACTCATACCCTCTGTTGCAGAAGATGGAGTCTTTCACCCAGAAGATGA
AGAATCTCGGGGTGCACATTGACACGTCCTCCTCTGGTGCTCTGCAGAAGTGTCTGTTCC
AGATCGAGTCTGATGACATCCGACGTGGACTTGAGACCCTATTGCTCAAGTGCATGAACC
GGGCCAAGTACTACGTTGCTGACAAGTCCGACGAGTTGGCACATTACTTCCTCAACGTGC
CTGTCTACACGCATTTTAACGCTCCTCTGCGACGGTACGCTGACCTGATTGTGCATCGAC
AGTTGAAGGCAGTGCTGTCCAACTTCTCCGTTCCCTACGACGAGTCGCTGGAGTTGCTCA
ACAACGCTGCAGACTACTGCAACTTCAAGAAGGACTCTGCACACAATGCCCAGGAGCAGA
GTGTGCATCTCTTCCTGTCGCAGGCCATTGCTGCCTTGTCGCAGAAGAAGCAGGCCCGAA
ACGGTGACATCATTAAGGAAGGTTTGGTGATCCAGGTGTACGAGTCTGCGTTCGACGTGT
ACATTCCGGACATTGGAATCGAAAAGCGAGTCCACGGCGACCAGCTGCCTCTCAAGAAGG
CCGAGTTCATCAAGAAGGACCGGCTTCTGGAGCTGTACTGGGAACAGGGCAAGTCTTCTG
CTGAGTTTGTTCCTGAGAACGAGCGAAAGAGCAAGGGACGAGGAGGCGACAAGGACACCG
GCAACGCCAGCAACAACAAGGAGTCTCTGGCTGACCAGGTCAAGGGCCTGTCTCTAGACT
CCAAGAGCCTGCCTTCTTCTCCCAAGCAGTCTCTGACCGGCGGTCTTCTTGCCCCCCACC
GGGCCATTTCCATGAACAAGTTGGAAAACGAGTACTGTGCTCGATCCGACGGAGATGGCT
CTAACAGCGACGACGAGTTGCTGCGGGATGTGGTGACCCGAGAGGAGAATGGCTACTTCA
TCCAGGAGATTCGCGAACTGCAGCGAGTGCCCATCATGTTGCGGGCTGAGCTCGGCAAGA
CTCTCCCCTGTCTTACTGTTCGAACCATCAATCCTTTTGCCTGAACGAGGATGAAAACAA
GCATATAAAACAATATATATAATGATTAAGAGAAGATGACCATCATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13717g_CDS-001

Protein length: 1213 aa.
Product: Translational repressor with a role in polar growth and wall integrity, putative

>YALI0F13717g_CDS-001 MSGNNNGSNNNGNNANGNQNLLPNPSSRGPRNLHIAHRRSPSELTPLMVEQIALQQQIDI
LQAQQQQILAQQQQFIHQPNLMPPPPMQQSYVTATGPFGQFGVQPVHQMGPPQSGGHRRA
QSSSHPNQHQQQPQQHFQGGHQSTPSQSGGGDRGHNRRQSLGLPEAIRAAAIEQQKRQGG
AGAVPASPQRNHSSGSNSSNPGSFKFPPTADDSSPTKSHSRSRSMAFGQQKRNQSPSRFQ
FPAGGHGSSPSTGGNFHPGHGHSRSNSRNFDQGGFVPGHRHRGSSVSSMHAFNSYGGGQQ
QRKSLFAPYLPQASLGQLMDQGRLVSGVLRVNKKNRSDAYVSTDGILDADIFICGSKDRN
RALEGDLVAVELLNVDQVWDSKREKEEKKKRKDQTTGDISDTVETTSGGANNSGGLQRRG
SLKQRPQQKRNDDVEVEGQSLLLSEEEELTDAAKPLYAGHIVAVIERVPGQLFSGTLGLL
RPSSQATKDRQEREGGHNNNNNNQHQEPPRPKIVWFKPTDKRVPLIAIPTEQAPKDFVEN
HESYANTLFAASIKRWPITSLHPFGTLVEEIGDANDDEIQIEAILRDNNFTADVFPDSAL
RAVPEETATGTPLTDEETEGRRDFTEEYTLGLSPNGILADQAFHIKKLGDDKIELGVHVL
DVTHYVQSNSALDREAKKRGSSCFLVQRDLNMFPDNFNSNFALTPGNNRLTISVVFEIDA
TTFDVSDTWIGTSYINTKQKLDYATVERIFDDKGGDDKAQIQAILAEGLLSQTDIDYVKT
LRLLSMEFKRDRFNCKNLNLGGKDLPALSLLNQIDDENLPISTDIYQALQISHIVDEVNI
KVNCAVAQKLYASLGPKAFLRRHSYPLLQKMESFTQKMKNLGVHIDTSSSGALQKCLFQI
ESDDIRRGLETLLLKCMNRAKYYVADKSDELAHYFLNVPVYTHFNAPLRRYADLIVHRQL
KAVLSNFSVPYDESLELLNNAADYCNFKKDSAHNAQEQSVHLFLSQAIAALSQKKQARNG
DIIKEGLVIQVYESAFDVYIPDIGIEKRVHGDQLPLKKAEFIKKDRLLELYWEQGKSSAE
FVPENERKSKGRGGDKDTGNASNNKESLADQVKGLSLDSKSLPSSPKQSLTGGLLAPHRA
ISMNKLENEYCARSDGDGSNSDDELLRDVVTREENGYFIQEIRELQRVPIMLRAELGKTL
PCLTVRTINPFA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG