YALI0F13695g

Overview

Description weakly similar to uniprot|C4R3I0 Komagataella pastoris hypothetical protein
Locus type CDS
Locus tag YALI0F13695g

Location

Species Yarrowia lipolytica Positions 1837337..1840704
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3368 (nuc.)
Previous locus YALI0F13673g Next locus YALI0F13717g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13695g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13695gYALI0F13695g_mRNA-001YALI0F13695g_CDS-001

Nucleotide sequence

 

>YALI0F13695g
ATGTCCGGGTCGGAACCCGTGTCGCCGAAAAGAGAAGATGCTAGCGATGAGCTGGGCGTC
GCCAGCGCCTCCATCAAAAAATCCACCCGTCCGGTCGCCAAGGCCGCTTGTCTGAGCTGC
CGCGAGCGAAAAATCAGATGCGAGGGCGTCCAGGACTGCTCGTACTGTAAGCAGATGAAG
TTGCCATGCGTGTTCGTCAAGAGCCATCGTGGCGGCCGTCGTCGACGTAAAGATGATGCC
GGCTCCAGCTCCAAGGTCGATACCCCTCCAGTCTCACATCAGCAGCTGCAGCACCAGCAA
CATCAGCAACCGCCCCCACAGCCGCCATTACTACAGCACCAACAGCCCCCACCACCTCCA
CCACAGGCGGCAAACACCCATTACCAGAGCCAGAGTCATAGCCAACATCACCAGATGTAC
GATGAGGGCCCAGGCTACTTTTATCCGGGTTCTCCAGGTTATGACCATACGCAGCACCTC
CAAGCTCAGCCTGGACCTCTTCATAGCCACCAGTCTGGACCCCCCCAACAGCATGCTCCC
CCTCATGGACCGGCTCACCCTCCTCCTCATGGGCAGCCGCACCAACCACACCACCCTGCA
CATGGCCCATCCGCCCACACACAACACATTTCGCCCAATGTGCAGTCGGTTTCTCCCCAC
GACTCTCACAGCTCGCATGGCCCTTCACCAGACATGCACGTTCACCAGCCACAAAAACCA
AGTCCAACCTACTTGAAGCCGGATTCTGGCCACCAGAACCAGGCACACCGATCCCCCAAC
CACGTCTCTCCAAACCATCCGGTCCACAACAACCATGTCTCTCCTCATCATGTTTCGCCA
CACAACACTGTGTCTCCCCACCACCAGGTGCCTTCCCACAATGTTTCTCCTAACCAGCAA
CCTCATCACGCAACAAATGGGACAACATTTACAACTCCCGCTCCTCCAACAGCGCCCCCA
ACGGCTCCTCCACAAGCATACAAGAGACCTGTGGACGCCCAGGGAGAGCAGCGGTCGAGT
AAAAAGCAAAAAACACGCATCGTGGGCAAATTCACGGAAAAACGGGGTCTGTTCACTCCA
CCAGAAAACACAAACCAGGTGATTGAGTCGATTTTCAAGGCGCTCAATCATATCCAGTCG
CAAATCACAGACCTGAAACGAGACCAAGCTATGAACGCAGCCTACAGATCATACTCGCGT
GAACAGGGATATGAGTCGTCGCCAGAAGTGGAACATCAGTCTTCAACAAGTAGCAGCACT
CGGCGTAAAGATGCGACTTCCAGCTCGAAAATCAAATTCACATTCACTAGCGAAGACTTG
ATATCACTGGACTTGCCCTGCATCGATGTCATTAATCTCTTTATTGACCTCTACTACGAG
TATTTCCACCCTAACCATCCGTTCCTGCTGCCTAAACGGATCTTTCTGCGAAACTTCTCT
CCCAGAACAGACGTGTCTGTGCTCCATGCCATGTTTGCGGTATCGTGTAGATTCGCTTCT
CTGAACATGGACGCCATTGAACAAGAGGCCAGCAGACAGCTGGTCCCTTACCTGCTAGAT
CCACAATACTGGATTTCTCGAATGCAAAAACACCAGGCTACTCTGTCGTCAGTTGAGCAT
GTTAAGTGCATGCTTCTTTCTGGCCACGCTCTGTTCTTCTCTGGACATGCTGAGAAGGGC
CGAAACTTCATCCAGTCCGCCTATCAACTCATCAAAATGCACAAACTGGAGATGCTGCAT
TCTGCCAACCCGGATGGTATCAACACAGAGATGACTGCTCTTCGAATCGCCAATTCTCAG
CAGCTTCTGATGCGTGAATCGCTAATTCGAACGCTTTGGGAGTTATGGGAGATCCGAGTC
ATGGTGGCTACCTTCCTCAACCGACCTGATGAAATTCCAGAGTTCTATACCCGCATCTGC
TTGCCTTGCAGCAACGAGCATTATGAGAACGAGCTCAAGGATTGGGACTACAAAAAGTAC
TATTGGAACGATTTTGAACAGAGTCTGTTACAAGGAGACCCTGCTATCAACGGCCCAGGT
ACCGTCTGCTACGATGTCGTATTCAAGATTGCCTCTCTCAACTTATTGGCGTCTGTGGTC
AAGGCCACGCCCGGTATTCAGTCTGGCTCGGGTCATTCAGTGCTGGCAGCTTATGACCGA
CGCCTTCGATCGCTCATGGGCCGTCTGCCCACCTTTAAAACCGAAAACCACGCCTACTTC
CTCTCCGAGTTTCTCAATACTAACCACCTCCATGTGCACCATCATGAGGACACTCCGGGA
GACTCGGATAACGGAGCCACAGCAGCCTTTCCTGGTCTGCGCCTCGATGAACGTAAGTTC
TCTCCCTTGCAGCACATCAACCCGACCTTTTACTTGGCCTATCAAGTGCTGTATATGGCT
GCCATAATCCTTCATCGAAACTCGGCTATTGAGAAGATGCCGTATCTGTTGACCTATCCC
GAGGCCCAAGGTAACGTCTCCACCCCTGCCATTGTGGAGAACCACCAGGCTCTGAACGAT
ATCTTCAACATGATGAGCAAGGAGGATGTCAACCTCAATGCTCTGCTAGACGAGAGTGTC
TACTCCACTCTAGATTTCAATGACGACTTCCATGTGGATGTGGTCAATTCCATCCTCTGT
CGTGTCCCTAGCAACAGTGCCTTTGGAACATGTGATTGGGCCTCTCACTGTATTTGGAAG
CTGGTCAACTTGACTCTTCCAGACGAGCAGCTGTTGACGAAGCATCACTCGGTGGATATT
CTCAAGCAGTTGGAATCGGCTCTGTTTGCTGACCCCGCCACAACCCAGAGCTACGACTTT
GCCGACTTTGACGATGACCCTCTCGCGCACTCTAGAGGACCTCAACAAAGAACGCAGATG
TTTGCTGGCACAAACAACTATTCCACAGCGTCTTTGAATCATAGTTTGATCCAGTCATGG
CTTCACATTTCGCCCTTTACTGGTCTCATTGTTTCTACTGCCTTCCCCGTGTTGGCTTCA
GTTGGAGCCCGTCACCTTGTGCTGGTGACTGCTTGCAAGCACAAGATGGCCTCTACTGAC
TCGCAGTTCATCCAGAGACACGAGACCATCACCGACAACATTGTGCGGAAGCTTCGTGAC
TTGCTGCTCATTCTGCGAGTCATTGGAGAGTACTGGGCATCTTTCCAGATGCACTACGAT
GTTGCCAGTGCCACATTGGACAAGCTGTTGTCACTGAGTGAAAAGACTTATTACACTGAT
AACAATCACTTTGACGACTTTAGCGGCAGCAACAGAAGCAGCTGAACAAGATGAGGAGGA
GGGTCACTAGGGCGATGGAATTTGTAAATATGTATATTAGATTAATGTTATTGGGTGAGT
TATTGATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13695g_CDS-001

Protein length: 1095 aa.
Product: Conserved hypothetical protein

>YALI0F13695g_CDS-001 MSGSEPVSPKREDASDELGVASASIKKSTRPVAKAACLSCRERKIRCEGVQDCSYCKQMK
LPCVFVKSHRGGRRRRKDDAGSSSKVDTPPVSHQQLQHQQHQQPPPQPPLLQHQQPPPPP
PQAANTHYQSQSHSQHHQMYDEGPGYFYPGSPGYDHTQHLQAQPGPLHSHQSGPPQQHAP
PHGPAHPPPHGQPHQPHHPAHGPSAHTQHISPNVQSVSPHDSHSSHGPSPDMHVHQPQKP
SPTYLKPDSGHQNQAHRSPNHVSPNHPVHNNHVSPHHVSPHNTVSPHHQVPSHNVSPNQQ
PHHATNGTTFTTPAPPTAPPTAPPQAYKRPVDAQGEQRSSKKQKTRIVGKFTEKRGLFTP
PENTNQVIESIFKALNHIQSQITDLKRDQAMNAAYRSYSREQGYESSPEVEHQSSTSSST
RRKDATSSSKIKFTFTSEDLISLDLPCIDVINLFIDLYYEYFHPNHPFLLPKRIFLRNFS
PRTDVSVLHAMFAVSCRFASLNMDAIEQEASRQLVPYLLDPQYWISRMQKHQATLSSVEH
VKCMLLSGHALFFSGHAEKGRNFIQSAYQLIKMHKLEMLHSANPDGINTEMTALRIANSQ
QLLMRESLIRTLWELWEIRVMVATFLNRPDEIPEFYTRICLPCSNEHYENELKDWDYKKY
YWNDFEQSLLQGDPAINGPGTVCYDVVFKIASLNLLASVVKATPGIQSGSGHSVLAAYDR
RLRSLMGRLPTFKTENHAYFLSEFLNTNHLHVHHHEDTPGDSDNGATAAFPGLRLDERKF
SPLQHINPTFYLAYQVLYMAAIILHRNSAIEKMPYLLTYPEAQGNVSTPAIVENHQALND
IFNMMSKEDVNLNALLDESVYSTLDFNDDFHVDVVNSILCRVPSNSAFGTCDWASHCIWK
LVNLTLPDEQLLTKHHSVDILKQLESALFADPATTQSYDFADFDDDPLAHSRGPQQRTQM
FAGTNNYSTASLNHSLIQSWLHISPFTGLIVSTAFPVLASVGARHLVLVTACKHKMASTD
SQFIQRHETITDNIVRKLRDLLLILRVIGEYWASFQMHYDVASATLDKLLSLSEKTYYTD
NNHFDDFSGSNRSS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG