YALI0F13673g

Overview

Description some similarities with uniprot|D5GMZ2 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0F13673g

Location

Species Yarrowia lipolytica Positions 1832584..1836450
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3867 (nuc.)
Previous locus YALI0F13651g Next locus YALI0F13695g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13673g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13673gYALI0F13673g_mRNA-001YALI0F13673g_CDS-001

Nucleotide sequence

 

>YALI0F13673g
ATGTCAGTGACCCACTCTGCAGCTCCATGGCCGCAATCAGACGACAAAGACGACGGATAT
GGCCAAGCATGCTACTCGCCCATGCCTACCATCCCACAGCGGTCTCGCCAGCGGCCCAAC
CAACGATCCATTGATTCCACCCAATCGTTCGAGACGGCTCACTCGTCAGTGTCCATTTCC
ACCAGAGATTCGGCGGTCTTTTCGAGTAACGACAACTCCACAGTCCCCTCGCCACAGCAA
CTGGATCGAGAGTGGCCCGACCCCCACTGGGATCTGAAGACGCCGACCTTGGAGTCGTTC
CAGGACGCCTTCCAACCCAGAACACACTCCGCCGGCCTAGATGAGCCCTTCTCAGCCTCC
ATCTACACAAGCAACAGCAACAACTACACATACGACACAGCATCTGCAACTACCGAGACC
GACAGTCTGCGGGCGCCCTCCATTGCTCCCCGAATCCCTGCTGCTCGTCTGCACATCCCG
CCTTCCATCTACGTGCCCGAAACGTTGCCTCTGACGCTCAATAAGAACAGCAGTAGCAAT
ACCTCGAGTCCCCAGCTAGACTGCAACATTGAGGACCCGTTTGCCATCCCCCAGCACACG
CCGTATAACCCGGACCGCACCCAGCATCGTCATCTGTCTCACAACTTCAATCTGGACGAC
TACAGATACGACAACTACGACGATACCCGCGACTTTGTTCTGGAAAGCGACGACACCTTC
TCCCTTACGGACTCCGCATCTTTGAGAACCGACGATAGCCCCCGTACATCTGCCATGCCT
CCCAAACGGCGGTTGGAGAAGGAGCTCCCACCTCTACCTCCACTGGATCATGTCTCACCT
AGCGGCCTAAACAAGCGTATCCCCCCGGGCCGTCAACAAACCCAAATGAATGCGACTCTT
CCTCCTCTTCCACCCAAAGACCGTAAGCAACAGCAGACACAGCAACACCAACGGCAGAAT
TCACAGCAGCTCAGCATCCCCTCATCGCCACCTTTGGATGTGCACCGAGCTCTGCAGTTC
AAAGACCCCTTTCTGACCCCCTGGATCGATAAGTCGAAACTTCGACAAACAAACGAAAAC
GAACTCGACAGCATGTCCATCAAGGCCAACGACGATGTTGGTCACGATAACGATAGCGAG
AGCTACCTCCCCTCAGGCTACCGTTCCATGGACCCTTATCTACGTGACTCGTACATGGGT
GCCATTCAGGGCGACCACATGATGGAGAAGAGCTCGTCCAGCTCGGAGGACGAAATTCAG
ATTAACACCGCCAACGTGGTGATTATCAAGAGGGAGGACGAGCGACAACAGAGCACATAT
CTCGATCCTAGTGAGTATACATTCCCCGCCCCCTATTTATCGATCTGCATGATGATGCCG
ATTTACGACCATTTTATTTTCCAATGTGACACGTTTTTCAAAATCTTTTGACATCCCAAT
GACAGCAATACCGTTTCCCTTTTCTCTCCCTGGCACTTGGCCACTTGCGACGTTTATTAT
TTGGATACCCGAACGTCAACAACCTGAAACCAGCTACCCATGTTAGTGCATCAGTGTCGC
CAACTTTAATGTTACAGTTACACGGGGTAAAGAGATCTTCATTAACTGTCACATCACTCT
CAAAGGGGATAAATACCCAAGTAGCATCAGCCAGTGGACGAAAGATATCGAAGGGAATTT
TGCTTGTTTTTTTCTTCGGCATGTACACAAGACGTGCCCAGTATGACCAACTACTTTGTT
ATCCCGTTATTCCTCACTCCATGTCTCAGAATCATTTGGGTTTCTGCAGCCGGGGTACTG
ATACATGTTTGTTGATTTGGTGTTAGTGAGGAATGCGGGGATCGTGGACGCTATGTTGGC
AATCTAGTCTCTCGACTTCGGACCACAATGACGATTCCTATTCGTCATCTGTTTGTTTCC
GTAGTTTTCCTTGCTACGGCCACAAGATACGATAAGCCATGCTTACTCATGGACGATGTG
CTAGCCCCTGTGTTTCACATTTTGCAGTTGGAAAATTGGTCACGCCAAATGTCATCTTCT
TTCATCGATCGATTTTTCGAACCATACTAACCCAGCTGCCATGGCTGACTCCGTTTCTTC
GGGCGACTTCTCTTTCTCACAGTTCCGTATCAGAGTCAATCTTCTTCGAGAACTGTACAT
GTCGGAAGTCAACTACTACAAGGACCTCAGTGTGGCTCTCAAGGTTTACCAGCGAACCCT
CAACTCCTCTCGATACAGGGGCTTCGTATGTAAGCATGATAAGGACGTTTTATTTTCCAA
CCTTGACGAGATTCTGCAGGTCTCCAGCCGACTCATCAAGAACATTCGAAAGAACTGTCC
CGCGCAAATTCTCGACAAGCGATACCCTATCGAGGGTAATGAGCTGGGTCTAGTCACCCA
GGATCTGAGTACTCAAGTGGGCCAAGTGCTATTGGACTCCATTTCCGAGATTGAGCTTTC
GTACCAGACTTATTGCAACGATAACGAGAAGCAGATGGAAACGTTTTACCGACTGTCTCA
GCTTGCTCCCCCTCGACTGCTCATCTGGTTCTACAACTGCACAGAGTACACCAAGGAGAC
TACCACAGCCTGGACTCTAGACTCATTGTTGATCAAGCCCGTCCAGCGTCTGCTCAAGTA
CCCCCTGCTACTCAAGAACATGCTCTCTGTGACTCTCGCCTCTCACCCCGACTATATGAA
CGTTCGAACAGCCCTTGTTGAGTACGAAGTTGTAGCTGACCGAATCAACAATGTCAAGAA
GCTCTTTGACAACAACAAGGCTGTCCAGCGAGACTTGCCCCCTCCTCCTTCCCAGTTGGC
CACCCCTCCCATGTCTCCTCGTCACTCTCAAGTTTCTTCCGCTTCTACACAATCTCCCAC
TTCTTTCTACTCTGCTGAGCCTGAGTTGCGAGAACTCAAGGGTGTGTTTGAGCGTAACAG
CATGGGTGGCCTTCAGCCTGTGCATTCTCACATCTCCTCTTCTCACCAGAGCATGCTGAG
TCCCACCTCTTCTACTCACTTTGAGCGAAGGAAGGCTTCTTCTCCTACTGAGCTGCATCA
TGGGGGCTCTTCCAAGCATACCAAGCTTGCTCACGACGAGCTGTTCACCCAGAAGCTTCT
CCACGACCAGATCTTCTTCGACAACGTCAAGTCTTTCTACAAGCATGGACACTACATCAG
AGACATGTTCAAGCTCATGACTGTGGAGATGGCCAAGATTGACGACTTCATGAGCTCATC
CAAGGCCATGACTGTTCTCTACGAGCGTCTGCTTCCCGGACGAGCCCAAGAAGTCATCAC
TCTGCCTGTTTCAGACACTGCTTCTATGCATTCATCTCGTTCGGCCTGGTCCGCTCGGTC
GAATAAGTCTCCCCACGAGACTCTGACTTTGCAGCATGCCATCCTCAAGCAGAAGATGAC
TGCTCGAGTCCTGGCTCCTCTCCAGCAGATGCTCCAGATCTACGACGTGGTCCGATCCAA
GATCAAAAAGCGAGACCGACTGGAGGGCTACTACATCCGATACTTATCTCATGAATGGGA
CATGCGACCCCCCATCAACCTCAATCTTCTTGGACTCAACTCGGATCATACTTTGGTGGT
CCCCCCCAACTTGGAGCCCACCACTCTCAAGAGAACACAGGAGTTGGCTGATATGTACAT
TACTTCGACTGTGTCTCTCAAGGACGAGTTCCCTCAGCTGTTCCAGATGACTCAAGAAGT
GTCCAAAACGGCATTTGCCACCTACATCCACATCAAACAGGATTGGACCCAGAGTTTCAA
GGCGTCTTTGCCTGATCTTTACATTTAATTTATAGCTTCGGCACTAACAGTAATGAATAT
ACTACACCAACTATCTTTGTTTTAATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13673g_CDS-001

Protein length: 1021 aa.
Product: Conserved hypothetical protein

>YALI0F13673g_CDS-001 MSVTHSAAPWPQSDDKDDGYGQACYSPMPTIPQRSRQRPNQRSIDSTQSFETAHSSVSIS
TRDSAVFSSNDNSTVPSPQQLDREWPDPHWDLKTPTLESFQDAFQPRTHSAGLDEPFSAS
IYTSNSNNYTYDTASATTETDSLRAPSIAPRIPAARLHIPPSIYVPETLPLTLNKNSSSN
TSSPQLDCNIEDPFAIPQHTPYNPDRTQHRHLSHNFNLDDYRYDNYDDTRDFVLESDDTF
SLTDSASLRTDDSPRTSAMPPKRRLEKELPPLPPLDHVSPSGLNKRIPPGRQQTQMNATL
PPLPPKDRKQQQTQQHQRQNSQQLSIPSSPPLDVHRALQFKDPFLTPWIDKSKLRQTNEN
ELDSMSIKANDDVGHDNDSESYLPSGYRSMDPYLRDSYMGAIQGDHMMEKSSSSSEDEIQ
INTANVVIIKREDERQQSTYLDPTAMADSVSSGDFSFSQFRIRVNLLRELYMSEVNYYKD
LSVALKVYQRTLNSSRYRGFVCKHDKDVLFSNLDEILQVSSRLIKNIRKNCPAQILDKRY
PIEGNELGLVTQDLSTQVGQVLLDSISEIELSYQTYCNDNEKQMETFYRLSQLAPPRLLI
WFYNCTEYTKETTTAWTLDSLLIKPVQRLLKYPLLLKNMLSVTLASHPDYMNVRTALVEY
EVVADRINNVKKLFDNNKAVQRDLPPPPSQLATPPMSPRHSQVSSASTQSPTSFYSAEPE
LRELKGVFERNSMGGLQPVHSHISSSHQSMLSPTSSTHFERRKASSPTELHHGGSSKHTK
LAHDELFTQKLLHDQIFFDNVKSFYKHGHYIRDMFKLMTVEMAKIDDFMSSSKAMTVLYE
RLLPGRAQEVITLPVSDTASMHSSRSAWSARSNKSPHETLTLQHAILKQKMTARVLAPLQ
QMLQIYDVVRSKIKKRDRLEGYYIRYLSHEWDMRPPINLNLLGLNSDHTLVVPPNLEPTT
LKRTQELADMYITSTVSLKDEFPQLFQMTQEVSKTAFATYIHIKQDWTQSFKASLPDLYI
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG