YALI0F13475g

Overview

Description similar to uniprot|P27476 Saccharomyces cerevisiae YGR159c NSR1 nuclear localization sequence binding protein
Locus type CDS
Locus tag YALI0F13475g

Location

Species Yarrowia lipolytica Positions 1803786..1805136
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1351 (nuc.)
Previous locus YALI0F13453g Next locus YALI0F13497g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13475g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13475gYALI0F13475g_mRNA-001YALI0F13475g_CDS-001

Nucleotide sequence

 

>YALI0F13475g
ATGGGTTCTAAATCTGCTTCCAAGGGCGTTTCCAAGCCCTCCAAGACTGACAAGAAGTCC
AAGGTTTCTTCCAAGAAGGCCGAGGCCATCGAGAAGTCCATTGCTGAGCTTTCCAAGAAG
AAGAAGGACGAGTCCTCTTCCGAGTCCTCCGACTCCTCCGACGACGAGGATGAGGAGATG
AGCGATGCCTCTTCCTCTTCCGACTCTGACTCTGACTCTTCTTCCGACTCTGACTCTGAC
TCTGACTCCGACTCTGACTCTTCCGACGACGAGAAGAAGGAGGACAAGAAGGTCGAGGAG
AAGGTTGTCAAGAAGGCCAAGAAGGAGGATTCTTCCGACTCTTCTGACTCCGACTCCGAT
TCTTCTGACTCTGACTCCGACTCTGGTTCTGACTCCGACTCTGACTCTGACGACGAGAAG
ACCGAGGAGAAGACTGAGGTCAAGGCCGAGACCAAGGCCGAGCCTGCCGCTGAGCCCGAG
GCTGCCGCTGAGCCCGAGTTCAAGACCGTCTTCGTTGGCGGTCTGTCTTGGAACGTTGAC
GACGACTGGCTCACCAAGGAGTTTGCTGATGCTGGCGCCGTTTCCGCTCGAGTCATCACC
GAGAAGGCCACTGGTCGATCCAAGGGTTTCGGATACGTCGACTTTGCCTCTGGTGCTGAC
GCCCAGAAGTGTGTCGAGGAGTTCCAGGACAAGGAGATTGACGGCCGAACCGTTCGACTC
GATATCTCTACCAACGTTCGACAGACCCCCGAGCAGAAGCAGCGAGACCGATCTTCTCAG
TACGGCGACCAGCTCTCCGAGCCCGCTGACACTCTGTTCGTCGGCAACCTGTCCTTCGAC
ACTAACCGAGACGATCTCTTTGGCATCTTTGGCGAGTACGGATCTGTTGTTTCCATCCGA
CTCCCCACCCACCCTGAGACCGAGCAGCCCAAGGGTTTCGGCTACGTCCAGTTTGGCTCC
GTTGACGAGGCCAAGGCAGCCCTTGAGGGTCTGTCCGGCTACGAGTACCTCGGACGATCT
TTCCGACTCGACTACACCTCTCCCAAGCCCGCTGGTGGCTTCAACGGCGGAGGACGAGGC
GGACGAGGTGGCTTCGGCGGTAACCGAGGTGGCCGAGGTGGCTTCGGTGGTGACCGAGGT
GGACGAGGCGGATTCGGCGGTCGAGGCGGTCGAGGAGGCTTTGGCGGCCGAGGTGGCCGA
GGCGGCTTCAACACCGGCGCTAACACCGCTCCCCTTGGCGAGTTCAAGGGTAAGAAGACT
ACTTTCTAAGCATCTCCCACTTACACACCCCCCCCAAAAAACAGGACTTAACATATAGAG
CATTGTATTATTCTTAACGATATGACAAAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13475g_CDS-001

Protein length: 423 aa.
Product: Nucleolar protein that binds nuclear localization sequences, putative

>YALI0F13475g_CDS-001 MGSKSASKGVSKPSKTDKKSKVSSKKAEAIEKSIAELSKKKKDESSSESSDSSDDEDEEM
SDASSSSDSDSDSSSDSDSDSDSDSDSSDDEKKEDKKVEEKVVKKAKKEDSSDSSDSDSD
SSDSDSDSGSDSDSDSDDEKTEEKTEVKAETKAEPAAEPEAAAEPEFKTVFVGGLSWNVD
DDWLTKEFADAGAVSARVITEKATGRSKGFGYVDFASGADAQKCVEEFQDKEIDGRTVRL
DISTNVRQTPEQKQRDRSSQYGDQLSEPADTLFVGNLSFDTNRDDLFGIFGEYGSVVSIR
LPTHPETEQPKGFGYVQFGSVDEAKAALEGLSGYEYLGRSFRLDYTSPKPAGGFNGGGRG
GRGGFGGNRGGRGGFGGDRGGRGGFGGRGGRGGFGGRGGRGGFNTGANTAPLGEFKGKKT
TF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG