YALI0F13453g

Overview

Description highly similar to uniprot|P17423 Saccharomyces cerevisiae YHR025w THR1 homoserine kinase
Locus type CDS
Locus tag YALI0F13453g

Location

Species Yarrowia lipolytica Positions 1801195..1802360
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1166 (nuc.)
Previous locus YALI0F13431g Next locus YALI0F13475g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13453g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13453gYALI0F13453g_mRNA-001YALI0F13453g_CDS-001

Nucleotide sequence

 

>YALI0F13453g
ATGTCTCGAAAGTTTGAAATTTCTGTGCCCGCGTCCTCGGCCAACATTGGTCCCGGTTTC
GACGTGCTCGGCCTCGCTCTGGCCAAGTTCCTCGTGATCAACGTCGAAATCGACTCGTCC
AAAACCTCGGACCGAAAGGACCCCAACAACTGCATTATCACCTACGAGGGCGAGGGAGCT
GACGGCGTTCCTCTCGACAGTGACCACAACCTTGTCACCCGAGTGGCTCTCTACGTTCTG
CGATGCAACGGCATTAGATCTTTCCCCTCGGGCACCTTTGTGCACGTCAACAACCCCATT
CCTCTGGGTCGAGGTCTGGGCTCGTCTGGAGCGGCTGTGGTGGCTGGTGTCATGCTCGGA
AACGAGGTCGGAAAGCTGGGCTTCTCCAAGCAGCGAATGCTCGACTATTGTCTCATGATC
GAGCGACATCCCGACAACATCACCGCAGCCATGATGGGCGGCTTTGTGGGTTCTTACCTG
CGGGAGCTGTCTGCTGCTGATCTCGAGCGAGTGGAGATCCCCCTTGCTGAGGTTCTCCCC
GAGCCTGCCGGAGGCCGAGATACCGGCCTTGTACCCCCCGAGCCTCCTCTCAACATCGGA
CACCACATCAAGTACGACTGGTGCCGAGAAATCAAGGCCATTGTGGTGATTCCCAACTTT
GAGGTCTCCACCGCCTCGGCCCGAGGAGTGCTCCCCACTGCCTACACTGCTTCAGATATG
ATCTTCAACCTGCAGCGACTGGCCGTTCTCACCACCGCCCTCACCCGATCGCCTCCCCAG
GCCGACCTCATCTATCAGGCCATGCAGGACAAGGTCCACCAGCCCTACCGAAAGACCCTG
ATCCCCGGTCTGCCTGAGATTCTGGCCTCCGTTACCCCCAAGACTCACGAGGGTCTGCTG
GGCATCTGTCTGTCTGGCGCTGGGCCCACCATTCTGGCTCTGGCCACCGACAACTTCGAG
ACAATCGCCAAGGAGATTGTGTCGCGATTCAACAAGGAGGGCATCGACTGCCGATGGGAG
GTCCAGGAGTTGGCCTACGACGGTTCCAACGTGAAGCAGCTCTAAGGTACGATGGCGTTG
ACACTCTGTTAGGGACACTCATGGAGGAAATGAGACCTTTGGAAAGGAACATGTGTAGAT
AGGATAAAATACTTCTTCTTGGTAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13453g_CDS-001

Protein length: 355 aa.
Product: Homoserine kinase, putative

>YALI0F13453g_CDS-001 MSRKFEISVPASSANIGPGFDVLGLALAKFLVINVEIDSSKTSDRKDPNNCIITYEGEGA
DGVPLDSDHNLVTRVALYVLRCNGIRSFPSGTFVHVNNPIPLGRGLGSSGAAVVAGVMLG
NEVGKLGFSKQRMLDYCLMIERHPDNITAAMMGGFVGSYLRELSAADLERVEIPLAEVLP
EPAGGRDTGLVPPEPPLNIGHHIKYDWCREIKAIVVIPNFEVSTASARGVLPTAYTASDM
IFNLQRLAVLTTALTRSPPQADLIYQAMQDKVHQPYRKTLIPGLPEILASVTPKTHEGLL
GICLSGAGPTILALATDNFETIAKEIVSRFNKEGIDCRWEVQELAYDGSNVKQL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG