YALI0F13365g

Overview

Description weakly similar to uniprot|A7SMR4 Nematostella vectensis v1g124011 predicted protein
Locus type CDS
Locus tag YALI0F13365g

Location

Species Yarrowia lipolytica Positions 1796214..1797066
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 853 (nuc.)
Previous locus YALI0F13354g Next locus YALI0F13387g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13365g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13365gYALI0F13365g_mRNA-001YALI0F13365g_CDS-001

Nucleotide sequence

 

>YALI0F13365g
ATGGACTACCACGAGTTGCTCCAGCTGAAGGCGTCAAAGTCGGCCAAGAAGGGAGGCAAG
GAGACGCTGGCCGAGCTGGACGAGTGGCGTAAGCAGCTGTCTGATGACGTACGAGAAAAC
CCCCGTGCTCTGACCCACGGTGAACTCGCCAAACTCATGACCTGGAAGCTGAAACGCGGC
ACGTTCCGTCCAAAACTGCAACAGCTCGCGGAATCGAACAGGGCCGAGGAGGTGGAGCAA
GTAACACAAAAAGCGGCTCATCTGATTGCAGGTGACGAGATCATCGAAGCAATCAAGGTC
TTGAGTGAGCTGAAAGGCGTGGGTCCGGCTACGGCGTCTCTGTTGGGGTCTGTCATGAGC
GTCAATGTGCCGTTTTTCAGCGACGAGGCGTTTGCGCACGTTTGTCCAGGTGTGAAAATC
ACGTACACGTTGAAGGCCTATGAAAAGTTCCTGAATGCCATTGTGGCATGGGGTCATCAG
CGAGATCTCAATGCCGTTGAAGCCGAGCAGGAAGCGTGGGTCTTGGGTATGAGAGACAAG
TATGCTGATAAGGGAACAAACAAGACCGGTAAAAAGGAGCAGGAAGATGTGAAGATAGTC
AAGACCAATGAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAAGAAGAGCGACCCGCGAAA
CGACGTCGTAGATAGACTCAACGGCCTAGGCTAGAAGAGATCAAACAGCCATCGCAAGAC
CGTCGTTTGTTACGTCGACAAACAAGACTTTAAGCCACAGAGTCTTCTGTCTGCTTGCAC
TTGTACCTATATGTCTGTCATGTATTTATTCATAATGTACTTGTTGTCATAGTCCAACAT
GTCCTCGGGTCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13365g_CDS-001

Protein length: 225 aa.
Product: Conserved hypothetical protein

>YALI0F13365g_CDS-001 MDYHELLQLKASKSAKKGGKETLAELDEWRKQLSDDVRENPRALTHGELAKLMTWKLKRG
TFRPKLQQLAESNRAEEVEQVTQKAAHLIAGDEIIEAIKVLSELKGVGPATASLLGSVMS
VNVPFFSDEAFAHVCPGVKITYTLKAYEKFLNAIVAWGHQRDLNAVEAEQEAWVLGMRDK
YADKGTNKTGKKEQEDVKIVKTNEEEKEEKEEKEEERPAKRRRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG