YALI0F13299g

Overview

Description weakly similar to uniprot|Q96W35 Ophiostoma novo- ulmi Glucan 1, 3 beta-glucosidase-like protein (Fragment)
Locus type CDS
Locus tag YALI0F13299g

Location

Species Yarrowia lipolytica Positions 1781696..1783843
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2148 (nuc.)
Previous locus YALI0F13277g Next locus YALI0F13321g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13299g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13299gYALI0F13299g_mRNA-001YALI0F13299g_CDS-001

Nucleotide sequence

 

>YALI0F13299g
ATGTTCCCCATAGGAAGGAAGGGCAATAGCCAGGACAAGGGGCGCAAGAGACCCCTGCTA
CGGAGCCACCTGTTGCCCATAGGAACTTCGCGTGATCTCCCCGATGCTGCCAACACGGCC
TCCACCGGCATGGCCACGGCCACGGCGCCGTCTGCGGTCGCTTCCGACCTCTCAAGCTCC
ATGTTTGTGCGCAAGGCCGTGCCGCTACGCTACGGAACCGCCCCCAACACGGGCGTTTCT
AGCGTACACAGATCCAACACGGTGCCCGCCCATGCCGTCTCCAGCAGAGCGCCATCGGTG
CACCCAGACAAGGAGCGCTCCAAGAGCGCAGAGATGGCAGCCGCAGTAGCTGGAATCAGA
CCTACCCCGCCGCCCGGGCGTCGGCTGCTTCCCGTACCTGCCCACACTCCTGCCCCCGTC
CGTTCCCATTCTCGCGTCCAGCCGCAGACACCCCGAATCGACTTTCTGCCACAAAAGAAC
CCGCTGCGAAGAGCAGCAACTGATACCTGGGATACCCGCACGTCGACACAACTGTCGACA
ATGCGCTCGTCGTCGTTCGGGTCGGTGCAAAGGACTGAAGACGACGAAGACAACGACAAC
GACAACAGCAACGACAACGACGACGACGGCGAAGACAGCGACACGACGCCCCAGCCCACG
CCCATCGCCAACAAGTACCTCAACACTGCTGTTCCTCTGGGCGACGTGGCAACTGCAGTG
GCCCCCAATAAGAATGCAAACTCCAACCCGGGGTTCGACATCAAATTCAGCTCTCCCACG
TTCGACCCCAAGAACAGCAGCACCGAAAAGGACGTGGAAAAGGGCGAGGGTGGAGAAGAC
GATGCAGATGGCAACGAAAGCACTGACGACAAGAACGAGGTGGAAATGGCCTCTCGCACT
GCCAACATCCACTCCGCACAGCCCACCTTTAGCTCCAACCCCGAGTACTTGTGGGAGCTC
GAAGACTTTCAGAAACGACGAGACGAGCGCAACAACAACGCCAGACACCTGATACGAAAG
ACAGAGGACGAGAAGCGACATGCCGAACGACGCAACAAACTCCTACTAGTTATTTGTTGC
GTGCTTGCAGCGGTGCTGATTGGCATCACTGTAGGTATGACTTCGACCATCCATCGGCTT
GAAAGATCAAATCAAAAACAAGGACTGGTCAACCAGAACAAACAGCACAACGATACCCAA
AGAACCGACGGCGGCATGTTACCCATTGGAATCGATACCCTGACAGATGCAGCCAAGCTC
GCAAGCATTCTGTCGGATACCTCTTTGCACAACGTTCTCTACGGCATTGGCTACTCGCCC
CAGAACGTCATGACATCCCAATGTGGAGTCAACCAGACGGAAGTGACCTTGGATGTTGCT
GCATTGTCTCGTGTTACAAAGCGGATCCGACTTTACGGCACCAGCTGTGACCAAGCCCTG
TACGTTTTACGGGCGATTGATTCCCTCAAGGTAGATATGAAAGTGACTCTCGGAGTGTGG
ATCAACGGCAACCCTGTAGTTTGCGCTGCGCAGATTGCTGAAGCAATCACTGCTGCTGAG
CAGTTCCCCCATTTGATTGAATCCATCATGGTGGGTAATGAGGTGTTTTTCCGCGGCGAG
CTCGCGCCAGCCAAACTTGTGGGCTACATGCATGAAGTGCGGACGGAGCTACAGCTTCGC
AACCTCACAATCCCCGTGGGCACCTCCGAGCTGGGCTCTCAATGGTCTCCGTACATGGCC
TCGAATGTGGATATTCTAGGAGCCAACATCCATCCATTCTTTGGAGGCCTTGAAGTGTCT
GAGGCGACCACCTGGACACTCAATTTCCTCGAGTCATTTGTCGTCAACGAGATTACAGAA
GCCGAAAAAATACCCCAAATTGTGATATCCGAGATTGGATGGCCCAGTGGAGGTGGTCAA
CACGGCGCTGCAAAGTCGGGTGTAGCGCAACAGCAGCGACTCCTACAAGACTGGGTGTGC
ACGGCCAAGGACTTGCCGCAGATTGGATGGTACTGGTTCGAGGCGTTTGACGAGCCGTGG
AAGCGTGTGTTTGACACCCCGACTGAAAAGTGGGAGTCTCAGTGGGGTATTTTGACCCCT
GACCGGCGTCTAAAAAAGGGGTTGTCGCTGAAAATCAGCTGTAATTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13299g_CDS-001

Protein length: 716 aa.
Product: Conserved hypothetical protein

>YALI0F13299g_CDS-001 MFPIGRKGNSQDKGRKRPLLRSHLLPIGTSRDLPDAANTASTGMATATAPSAVASDLSSS
MFVRKAVPLRYGTAPNTGVSSVHRSNTVPAHAVSSRAPSVHPDKERSKSAEMAAAVAGIR
PTPPPGRRLLPVPAHTPAPVRSHSRVQPQTPRIDFLPQKNPLRRAATDTWDTRTSTQLST
MRSSSFGSVQRTEDDEDNDNDNSNDNDDDGEDSDTTPQPTPIANKYLNTAVPLGDVATAV
APNKNANSNPGFDIKFSSPTFDPKNSSTEKDVEKGEGGEDDADGNESTDDKNEVEMASRT
ANIHSAQPTFSSNPEYLWELEDFQKRRDERNNNARHLIRKTEDEKRHAERRNKLLLVICC
VLAAVLIGITVGMTSTIHRLERSNQKQGLVNQNKQHNDTQRTDGGMLPIGIDTLTDAAKL
ASILSDTSLHNVLYGIGYSPQNVMTSQCGVNQTEVTLDVAALSRVTKRIRLYGTSCDQAL
YVLRAIDSLKVDMKVTLGVWINGNPVVCAAQIAEAITAAEQFPHLIESIMVGNEVFFRGE
LAPAKLVGYMHEVRTELQLRNLTIPVGTSELGSQWSPYMASNVDILGANIHPFFGGLEVS
EATTWTLNFLESFVVNEITEAEKIPQIVISEIGWPSGGGQHGAAKSGVAQQQRLLQDWVC
TAKDLPQIGWYWFEAFDEPWKRVFDTPTEKWESQWGILTPDRRLKKGLSLKISCN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG