YALI0F13255g

Overview

Description similar to uniprot|P53600 Saccharomyces cerevisiae YPL010w RET3 coatomer complex zeta chain
Locus type CDS
Locus tag YALI0F13255g

Location

Species Yarrowia lipolytica Positions 1775932..1776636
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 705 (nuc.)
Previous locus YALI0F13233g Next locus YALI0F13277g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13255g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13255gYALI0F13255g_mRNA-001YALI0F13255g_CDS-001

Nucleotide sequence

 

>YALI0F13255g
ATGACGTCGGAATACTCGGTAGAGGCAGTGCTGCTGCTGGACAAGGACGGAAAGCGACTC
TTCACCAAGTACTACTCGCCCCCACACGGCGACGTGCAATCACACGAGCAGCTTCAGACC
CTGACGACACTCAAGGACCAGCAGACGTTCGAAAAGGGCCTGGCGCAGAAAACCCATCGA
CAGAATGGTGACGTCATCATCTTCGACAACAAGGTGGTCGTGTACAAGACGGTTGTGGAC
GTGACTCTGTACGTGGTCGGATCGTTTGAGGAGAACGAGGTGATGCTGTACCAGCTGGTT
GCCGGCATCAAGGACGCGCTGGAGATTCTGCTCAAGCACTCGTTCGACAAGCGGTCTGTG
CTCGAACACTTTGACCTGGTGGCTCTGGCTATCGATGAGGCCGTCGACTCGGGCGTCATT
CTCGAGATCGATCCCGTCGTCATCGCAAGTAGAGTCACCCCCGCACCCGCCAAGGAAAGC
ATTGCGTACGGAGGAGTGGAGATCAACGAACAAACCATCTCGAACGTGTACCAGAAGTGG
TCGCAGCGAGCTGGCAAGTTTTTCAGCTAGATGGAGGATGTATATGGAGGTAATAAGATG
GATTTTGTGCAACATGTAGCGCGACTGTGACCCAGCTGCTCGGTGAGGGCCATCTGCTTG
CGTTGCAAGTACTGTACTATAGATAAATATTGTGTTTTTGTGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13255g_CDS-001

Protein length: 190 aa.
Product: Zeta subunit of the coatomer complex (COPI), putative

>YALI0F13255g_CDS-001 MTSEYSVEAVLLLDKDGKRLFTKYYSPPHGDVQSHEQLQTLTTLKDQQTFEKGLAQKTHR
QNGDVIIFDNKVVVYKTVVDVTLYVVGSFEENEVMLYQLVAGIKDALEILLKHSFDKRSV
LEHFDLVALAIDEAVDSGVILEIDPVVIASRVTPAPAKESIAYGGVEINEQTISNVYQKW
SQRAGKFFS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG