YALI0F13013g

Overview

Description similar to uniprot|Q873H2 Neurospora crassa NCU03388.1 hypothetical protein
Locus type CDS
Locus tag YALI0F13013g

Location

Species Yarrowia lipolytica Positions 1747405..1748551
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1147 (nuc.)
Previous locus YALI0F12991g Next locus YALI0F13035g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13013g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13013gYALI0F13013g_mRNA-001YALI0F13013g_CDS-001

Nucleotide sequence

 

>YALI0F13013g
ATGAACTCCAACCAAGACTTCACCCCCACCTTTGACGAGTACGGGGCCGACAATCTCACC
GACGTCCATCCCGAGGCCACCACCTCCAACGATGACAATCTCAAGAACAAGGACCCCCTG
CACGCGCAGTCGCCCGTCTACGTCAAGCCGTTCGATAAGGGCGATCTGCAGCCGTCGTAC
GCCAACGAGATCCCCGTGCAGCACTGGGGATGGTACGAGTCTTTCATCGACACCATCGGA
GGCATCATGGGTGGCCTGGGAACAATTCCCTGCTGTTTCTGTTGCCCCAACCCGTTCAAG
TCCGTGCACCAGGGCCAGGTTGGTCTCGTGACCAAGTTTGGCCAGTTCTACAAGTCCGTG
GACCCCGGACTCACCAAGGTCAATGTTCTTTCCGAGAAGCTGCACTTTGTGGACGTGATG
GTACAGGTTCTGGACGTGCCCCACCAGCAGGCCATGACCAAGGACAACGTCAGCATCACA
CTTTCTTCGGTGCTTTTCTACCACGTGGTCGCTCCCCACAAGGCCAAGTTTGGCGTCAAC
AACGTGATTCAGGCGCTCCAGGAGCGGACCCAGACTACTCTGCGACTTGTGGTCGGATCC
AGACCTCTGCAGGACATGATTGAAAAACGAGAAGAGGTGGCTGCTTCTATCCAGGCCATT
ATTGAAGAGCGAGTCGCCGACTGGGGAATCAAGGTCGAGTCCATTCTCATCAAGGACATT
GTGCTGTCCCAGGAGCTGCAGGACTCGCTTGCGCTTGCTGCCAAGTCCCGACGAGCCGGA
GAGTCCAAGATTATCAACGCCCGGGCCGAAGTCGAGTCTGCCAAGCTCATGCGAAAGGCT
GCCGACATTCTTGCCTCCAAGGCCGCTATGCAGATTCGATACCTGGACGCCATGCAGAAC
ATGTCTCGAAGCGCCAACTCCAAGGTCATTTTCATGCCCTCTGCCGGCGCCATTGAGAAC
ATTGCTGATCAGGCGGGAGCCGGATCTTCGAAAGACGACGACCTGACTAATACCGCAGTC
AACCAGACCGCCATGTTCGAGGCTCAGTTTGACCGGGTTTGATGGAGTTGAGCCTGCCAC
TTTCCTTTCTTGAGTATTTATAACTAATTAGTCTATTATATTTAATGTTGAACAGAGGCA
GAAGAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13013g_CDS-001

Protein length: 354 aa.
Product: Conserved hypothetical protein

>YALI0F13013g_CDS-001 MNSNQDFTPTFDEYGADNLTDVHPEATTSNDDNLKNKDPLHAQSPVYVKPFDKGDLQPSY
ANEIPVQHWGWYESFIDTIGGIMGGLGTIPCCFCCPNPFKSVHQGQVGLVTKFGQFYKSV
DPGLTKVNVLSEKLHFVDVMVQVLDVPHQQAMTKDNVSITLSSVLFYHVVAPHKAKFGVN
NVIQALQERTQTTLRLVVGSRPLQDMIEKREEVAASIQAIIEERVADWGIKVESILIKDI
VLSQELQDSLALAAKSRRAGESKIINARAEVESAKLMRKAADILASKAAMQIRYLDAMQN
MSRSANSKVIFMPSAGAIENIADQAGAGSSKDDDLTNTAVNQTAMFEAQFDRV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG