YALI0F12925g

Overview

Description similar to uniprot|P41948 Saccharomyces cerevisiae YNL142w MEP2 high affinity low capacity ammonia permease
Locus type CDS
Locus tag YALI0F12925g

Location

Species Yarrowia lipolytica Positions 1735052..1736413
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1362 (nuc.)
Previous locus YALI0F12881g Next locus YALI0F12947g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12925g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12925gYALI0F12925g_mRNA-001YALI0F12925g_CDS-001

Nucleotide sequence

 

>YALI0F12925g
ATGTCAGAATATGAACTACCCGACCTAGTATGGGTGACGACAAGCGGAGCGTTAGTGTGG
CTCATGGTGCCTGGAATCGCGTTTCTATACTCGGGATTGTCGCGCAAAAACCATGCCCTG
GGTGCTCTTTGGACTGGAATGATGACTCTCGGCGTCTCCTTCTTCCAGTGGTGGTTGTGG
GGCTACTCGTTGAGCTTTTCGGCCAAGGATAACGGTCAACACTTCATTGGAGGAATGGAA
CACGTTGTTGCTCAACATGTATGGACTTCTCGGTCGGCTTCGACGCCCACAGTTCCCGAT
GTAGTGTGTTACTTCTACCAGGGCATGTTTGCGTGTGTCACTGCAGCTCTCATGATTGGC
GGAGGAAACGAGCGAGTAAGACTGGGGCCTTTGGCTGTGTTTCTTTTCATATGGCAGACA
ATTGTGTATTGTCCAATTGCCTACTGGACGTGGAACCCCAATGGTTGGGCTGCTCGTTTG
GGCAGTCTGGACTTTGCAGGGGGAGGACCGGTTCACATGTGCTCTGGAAGTGCAGCCATG
GCGTTTGCCTTGGTGGTTGGACGTCGAAAAAGTCCAGCTTGTGACTTTGTGCCTGCCTTC
AGGCCCTCGTCGGTAGCCTACATCATCATGGGCACCATCATGCTGTGGTTTGGGTGGCTG
GGGTTCAACGGAGGCTCTGCTGGGGGAGCCAGTGTGCGAGGAATTGTGGCCATGGTGAAC
ACCAATCTGGCGGCTTCCTGTGGTGGACTCACGTGGATGATGGTGGACTACTTCCGACAC
AATGGAAAGTGGACTGCCATCGGTATCTGTTCGGGAGCCATTGTGGGGCTTGTGGGGGTC
ACTCCAGCTGCCGGATTTGTGCCCGCGTGGTCGGCGGTAGTTATTGGAATTGTTTCTGGA
GTCGCAGCCAATCTCGGAATCGGAATCAAGGGTGTTGTATACATCGACGACGGTCTAGAC
GTGTTTGCGCTCCATGGAATTGGAGGCTTTACAGGCTCAGTCATGACCGCCTTTTTTGCG
TCCGACTGGGTCACAAAAACAGACGGAGTCACCGTAATCCAGGGCGGATGGGTCAACGGA
CATTACGTCCAGCTGGGCTACCAATTGGCCTCGGCATGTGCTACCATTGGCTGGTCCTTT
GCCATCACCTACCTCATTCTCATCACCATGGACTTGATCCCGTTTCTGACCCTGAGAATG
GACGCAGTGGATGAACAACTAGGCACCGACGTGACCCAACTGAGCAACGAGTGTCCTGAG
CAGTGGGAGGAGTTGACCCTCTATCTCAGACCGTGGCTGGAGAATGTGGAGAAGGAGAAA
CAGGAAAGAATGGCCCAGGAGGCCATGCACCAGGTGGTATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12925g_CDS-001

Protein length: 454 aa.
Product: Ammonium permease involved in regulation of pseudohyphal growth, putative

>YALI0F12925g_CDS-001 MSEYELPDLVWVTTSGALVWLMVPGIAFLYSGLSRKNHALGALWTGMMTLGVSFFQWWLW
GYSLSFSAKDNGQHFIGGMEHVVAQHVWTSRSASTPTVPDVVCYFYQGMFACVTAALMIG
GGNERVRLGPLAVFLFIWQTIVYCPIAYWTWNPNGWAARLGSLDFAGGGPVHMCSGSAAM
AFALVVGRRKSPACDFVPAFRPSSVAYIIMGTIMLWFGWLGFNGGSAGGASVRGIVAMVN
TNLAASCGGLTWMMVDYFRHNGKWTAIGICSGAIVGLVGVTPAAGFVPAWSAVVIGIVSG
VAANLGIGIKGVVYIDDGLDVFALHGIGGFTGSVMTAFFASDWVTKTDGVTVIQGGWVNG
HYVQLGYQLASACATIGWSFAITYLILITMDLIPFLTLRMDAVDEQLGTDVTQLSNECPE
QWEELTLYLRPWLENVEKEKQERMAQEAMHQVV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG