YALI0F12727g

Overview

Description some similarities with uniprot|Q8W378 Oryza sativa Putative tetratricopeptide repeat protein and Neurospora crassa NCU08664.1 predicted protein
Locus type CDS
Locus tag YALI0F12727g

Location

Species Yarrowia lipolytica Positions 1705556..1706532
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 977 (nuc.)
Previous locus YALI0F12705g Next locus YALI0F12749g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12727g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12727gYALI0F12727g_mRNA-001YALI0F12727g_CDS-001

Nucleotide sequence

 

>YALI0F12727g
ATGAAAATCGAGGAGATTGTGGACGAGGTAGAGGAGCTGGTGATTTCGGACGACGACACG
TCAGAGCCGTTTCTGAAGGAGAAGCATCTGGATTTGGAGGGCAAGCCCATCAAGAAGCGA
GCACCCAAGAAGAAGGAGAGCGAGGAGACCAAGCAGAGGCGAGATGGGGTGGAATCTCGG
TTCAGGAACGACAGATCCAGTGATCTGAACCAGGACAAGATTGAGGAGGTTAAGGAGGAC
GACAAGGACAAGAGTGGGGCCACCGAGGATCTGAAGGAAGAGTCGGAACCAGAGGAGGAC
GATCTGACCCAAAAGTTCGCCCCTGAAGAAGAAAAGAAGCTGGTGGATGAAGCTGAGGAG
TTTAAGGCTCGAGGCAACAAGTGGTTCAAAAAGGGCGATAACGACAGTCTCAAACGGGCC
ATCAACAGATACGACAGTGCGCTCAGAACGTGTCCTGTCTACCTGCATCAGACGCGAGCA
ATCTACTGGTCCAACAAGGCCGCATGTTACATGAAGCTAGGAGACGATCACAAGGCCGTG
GAGAGCTGCAATCAGGCCCTAGGGCTCGATCCAGACTACGTCAAGGCTCTCAATCGCAGG
GCTGCTGCTAATGAGAAGATTGGCAAATGGTCGAATCTACAGTCTGCCTCAGACGACTAC
AACAAGCTGGTGGAGCTGTATGGAAAAGATGGCAACTACATAGAGCGGGACAAGGCTCGC
AAAAACGGCATTGCTCTGGAGTCTCGCATCAAAACGGCCGCTACTGCAGAAACCCAGGAG
ATGCTGGGTAAACTGAAAGACATTGGCAACTCCTTCCTCGGCAAGTTTGGCATGAACACC
GACATGTTCAATATGGCTCCCGACGGAAAGGGAGGCTACAGCATGAACTTTGGAGGAAAT
CAGCCTCCCAAGGAGTAGACCCAATGGTGGAAAGAGTGTAAAATAACGCAAATTAGATAT
TTATGTGCCCAAGGATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12727g_CDS-001

Protein length: 306 aa.
Product: Conserved hypothetical protein

>YALI0F12727g_CDS-001 MKIEEIVDEVEELVISDDDTSEPFLKEKHLDLEGKPIKKRAPKKKESEETKQRRDGVESR
FRNDRSSDLNQDKIEEVKEDDKDKSGATEDLKEESEPEEDDLTQKFAPEEEKKLVDEAEE
FKARGNKWFKKGDNDSLKRAINRYDSALRTCPVYLHQTRAIYWSNKAACYMKLGDDHKAV
ESCNQALGLDPDYVKALNRRAAANEKIGKWSNLQSASDDYNKLVELYGKDGNYIERDKAR
KNGIALESRIKTAATAETQEMLGKLKDIGNSFLGKFGMNTDMFNMAPDGKGGYSMNFGGN
QPPKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG