YALI0F12573g

Overview

Description some similarities with uniprot|Q03761 Saccharomyces cerevisiae YDR145w TAF61 TFIID and SAGA
Locus type CDS
Locus tag YALI0F12573g

Location

Species Yarrowia lipolytica Positions 1679630..1681826
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2197 (nuc.)
Previous locus YALI0F12551g Next locus YALI0F12595g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12573g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12573gYALI0F12573g_mRNA-001YALI0F12573g_CDS-001

Nucleotide sequence

 

>YALI0F12573g
ATGTCAATGTGCGACTTTGAAGAGGTGTCTCTCAACACAAACTACCGACGGTTCGCGTCC
GCGTCCACGTCCACGCTCACGTCCTACTCGTCGGTGTCCCTGGCCGGAGACAACAAGAAG
GACCGTACCCTGAGCGGCCGGCTGTCCAGAGTGTCCTCCACCACGTCGCTGGCGACTGAA
CCACCGGCGCCGCGCCCCAACAAACACAAAAAGACCTCCAACAAGTACAGAAACTCGTCT
CTCAGCAACTTGTCCAAACTGGACGCCATTGATGACGTGCCCGCCCCCCATCAGCAACAT
CAACAGCAACAGCAACAGCAGCAGCGACCGTCGAGACAAAACTCCGTCTGTTCCACCCAG
CATTCAATCAGCCCCACAACGTCGCCTCGACACTCGCGTACGTCTGTCTACTCGTTCCAG
TCGCGGTCGTCAGTGGCGCTTTCTGAGCCCGGAAGCCTTGTGCTGCCCAAACGACAGCCG
TCCCAGAAGGAAAAGAAGGCCGCCAACCGCAAGAAGATTCTGCAAAACCAGTCGTTTGTT
GACGACGACGATGAGGACGCCATCGACATTGACGATCTCAGCGCATGGAACATCCCCCTA
GCGCCCTCGCTCTACCAAAAGACCCGGGAGTCGTCCTCCAAGCTGGCGCTGGAAACCCTC
GGAGCCGCCTCCCACACAAACCTCCCTAACCAGTCACAACAACAACAACAACAACAACAT
CAACATCAACTCCATAGCATTAATCACAACCCCAACCACAACATGAACGCGCCGTCGCCG
GCCATGGACTCTTCTGCCAACTCAACCACATCTACCATGCTATCATCCGACGACCCCAAC
ACCCCCGACGGCTCCTTCTCCGTCCCCCGCATCATGGACATGTCATCGCTGTTCGACTCG
CTGTCGCCCATAGCCCAGGAGCTCTCGGTGGCCTTCACCGAGTCGCCCAAGGCCCTGCAA
CACGAGCAGAAGATTGAGCTAGCCCAGAACCGCCACTCCAGCGGTTCCACCCACTCAGCG
TCGTCATTGTCGTCCCCAGCGTCCTGCACCCGTCCGGCCTTTCTGCCCCCCAAGGACCGC
AAGGAGGAAAAGAAGCATCTGCGCGAGTACCAGCGCATGGTTGAGGAGCGAGCGGCGGTG
GAAAAGGCCCTTGCTGCCAAGGAGGCGAAGCGACAGAGCGAGCGAGCCGCCCGACAGCGC
GAAAACGCGTTCCAGTGGAAGACGGAAATCATCCCCAACTTCCACACTGCCATCCAAAAC
CCAGCCACCCGCGAGCTGTGGTGGGCCGGCGTGCCCTCGGCCTCGCGAGGCTTTGTGTGG
ACCGAGCGAATTGGCAACGCGCTGGAGCTGTCTCAACCGCAGTTTGACAAGTTCAGCAAA
AAATCGGCCACCAAGTCCGTCGAGTTTGCCGACGTGGATCTCGACTCGGTGTACCCGGAG
CTCAAGATGTTCGGCGCCGGATGTCCCTACCATGACGATCTGGACGCCGTTCTGCGGGCC
CACACCGCATACTGGGCAGCCCGAGATGCCAACGCCAACCCCCATACCAACAAGGTGGCA
TGTGCGGCAGCATCTCTGATTCTGGCGCTGGGCTCTCCATTCCAGTCGTGGGTCGCCTTG
GAGAACCTGCTCACCCGCGGCCATCTCATCAGACCCATGTTTGCCCGGGACGAGCAGGCG
CTCATTGCATGCTACACCTCGTTCCTCAAGGTGTTTTCCACCCGGCTGCCGTCGCTGTAC
CGACACTTTCAGTCGCAGAACGTGTCGCCGTCGGCCTACCTGACGCCGCTGGTCATGTCG
CTGTTCACTGAGCAGTTTTCTCTGGACGTCACATTTCGAATCTGGGACGTGATGCTGTTT
GAGGGCGACTCGTTCATGTTCCGGGTCGCTCTGGCCACTCTGGCCAAGCTGGAGCCCTGT
CTCTATGGTTCTAAGGAGGAGATCATGGCCCAGTTGCGGTCCGACAAGCTGCAACAGGAG
ACTGAAGATGATTTTATGGACGCGGTTCGTCAGGTTCTGCGGGTCAGTCAATAATTGCAT
GAGTTTGTCTACCAGTGACGCCGGTGTCGGCGTTGCCAGTAGATGAGCGAATCAGTAGCT
CATATGGGTTTACTGGGGTGCAGTTCTTTATTGAACTGCCGTTTAGTACAAGTATATATA
TATATATCAACATTCACTGGTTGAGATTGTGAGTAGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12573g_CDS-001

Protein length: 678 aa.
Product: Conserved hypothetical protein

>YALI0F12573g_CDS-001 MSMCDFEEVSLNTNYRRFASASTSTLTSYSSVSLAGDNKKDRTLSGRLSRVSSTTSLATE
PPAPRPNKHKKTSNKYRNSSLSNLSKLDAIDDVPAPHQQHQQQQQQQQRPSRQNSVCSTQ
HSISPTTSPRHSRTSVYSFQSRSSVALSEPGSLVLPKRQPSQKEKKAANRKKILQNQSFV
DDDDEDAIDIDDLSAWNIPLAPSLYQKTRESSSKLALETLGAASHTNLPNQSQQQQQQQH
QHQLHSINHNPNHNMNAPSPAMDSSANSTTSTMLSSDDPNTPDGSFSVPRIMDMSSLFDS
LSPIAQELSVAFTESPKALQHEQKIELAQNRHSSGSTHSASSLSSPASCTRPAFLPPKDR
KEEKKHLREYQRMVEERAAVEKALAAKEAKRQSERAARQRENAFQWKTEIIPNFHTAIQN
PATRELWWAGVPSASRGFVWTERIGNALELSQPQFDKFSKKSATKSVEFADVDLDSVYPE
LKMFGAGCPYHDDLDAVLRAHTAYWAARDANANPHTNKVACAAASLILALGSPFQSWVAL
ENLLTRGHLIRPMFARDEQALIACYTSFLKVFSTRLPSLYRHFQSQNVSPSAYLTPLVMS
LFTEQFSLDVTFRIWDVMLFEGDSFMFRVALATLAKLEPCLYGSKEEIMAQLRSDKLQQE
TEDDFMDAVRQVLRVSQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG