YALI0F12353g

Overview

Description similar to uniprot|O88696 Mus musculus putative ATP- dependent Clp protease proteolytic subunit, mitochondrial precursor
Locus type CDS
Locus tag YALI0F12353g

Location

Species Yarrowia lipolytica Positions 1656755..1657886
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1132 (nuc.)
Previous locus YALI0F12364r Next locus YALI0F12375g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12353g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12353gYALI0F12353g_mRNA-001YALI0F12353g_CDS-001

Nucleotide sequence

 

>YALI0F12353g
ATGCACGTTAATCCCACCTCTTTAACTCCACAACCCATGATAGCGATACTAAAAGGAAGT
TCACGGGTGCCACGGGTCCGACAGTTGGCCGCGGTGACGCAAAAACGCCGATATTCCGAC
TTCTCCATCCACGACATCCCCGCCAAGCTACTCAACGAGCGAATTGTGCACGTGGCCGGC
CCCATAGACGACTCCATGGCCACCTCGGTGGTGGCGCAATTGCTCTATCTGGAACACAAA
TCGGCTCAGAAACCGATCCACATGTATATCAACTCGCCCGGAGGCGCCGTGACGGCCGGG
TTCGCCATTCTCGACACTATGAACTACATCCGAAGCCCCGTCCACACCGTCTGTCTCGGC
CAGGCCGCCAGTATGGCATCATTACTACTCACCTGTGGCGCGCCCGGCAACCGCATCATG
ACCCCAAACTCGACAATCATGACACACGAACCACTGGGAGGCATTGTTGGCAGCAGTAAG
CTGGTGGAGCTGCACACATTCCACTTGCAACGGATCCGAACCCGAATCATCCAACTGTAC
TACGATAGCATGAAACTGGGCCTGGAGGGAAGACTGAAGGAGGAAGGAGCAGAGGAGACT
CATGAGGCGGCAGAACCGACCCCGTTGATGTCGTTGTTGTCGTCGGACCGATCCTGGATC
GATACCATCAACCAAAAGACCCTGACCCACTCGCTAGTAGACACTCTCATTGGTCTTGAT
CAGTTCTTCAACGCCGACGAGGCTTTGAAGCTGGGACTGGTCGATCGGATTCTCAAGACC
AAAGGCGAATAGATGCATGATACGACCCGGCAAACGACAACCAACCCCGCATGGACATAA
ATGGAACTGAAACATAGACATGCACGCCAGGAATGAATAACGAATACACATGACCACACC
AGCAGTGCCCAAGACGTGCTGTACTCAATCTTCATGAGAGCAACGTCAATGACTTGCCAA
CGAAAACACAGGAGCAACCGAATCAGATGAGAACACTTGGTATTCAAGGACAAGAGTCAT
AACCCCACACCGACACGCTCAACCCGAGATATGCTGTCTTGATTAACCCATCTCGTATTC
GTATCACCCTCTGTAAAGCTCATATCAATAGTATACTCACTACTAGATTCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12353g_CDS-001

Protein length: 264 aa.
Product: ATP-dependent protease proteolytic subunit, putative

>YALI0F12353g_CDS-001 MHVNPTSLTPQPMIAILKGSSRVPRVRQLAAVTQKRRYSDFSIHDIPAKLLNERIVHVAG
PIDDSMATSVVAQLLYLEHKSAQKPIHMYINSPGGAVTAGFAILDTMNYIRSPVHTVCLG
QAASMASLLLTCGAPGNRIMTPNSTIMTHEPLGGIVGSSKLVELHTFHLQRIRTRIIQLY
YDSMKLGLEGRLKEEGAEETHEAAEPTPLMSLLSSDRSWIDTINQKTLTHSLVDTLIGLD
QFFNADEALKLGLVDRILKTKGE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG