YALI0F12375g

Overview

Description some similarities with uniprot|P34761 Saccharomyces cerevisiae YNL197C (ohnolog of YDL224C)
Locus type CDS
Locus tag YALI0F12375g

Location

Species Yarrowia lipolytica Positions 1657972..1659936
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1965 (nuc.)
Previous locus YALI0F12353g Next locus YALI0F12397g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12375g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12375gYALI0F12375g_mRNA-001YALI0F12375g_CDS-001

Nucleotide sequence

 

>YALI0F12375g
ATGTCATTTGCATTTGAGGGCCAGCCTCAGCATAGCCCCTTCTTCTACGAGGGCCAACAG
CATCAGCATCAGCATCAACATCAACATCAGCACCACGCCGGCCCGCAACACAGCAGCCAG
CAGCACCCCCAGGGCCCGCATCAGGTACAGCAGCAACAACACGTCCCGCCGCAACACCAG
GGCCACCAGCAGCATCAACAGCAGCAACACGCGGGACCCGCGCCCCCTGGAAAGGTGAAC
CTGACCCAACTGCCACGCGACGTGACCCCGCGTGAACTGCGGCTGCTGTTCGCTTTTGCA
CCCGACTTTCTGCATTGCGAGCTCCACAAACTGCCGTTTGGCGACGACTCCCCCATCGGC
ACCGCATACTTCCGCACCTACACGGCCGCCATCAACTGCCAGGTGACCCTCGACGGCCGT
ACCGACCTCTTTGGTGACGACACCTATCCGCTCAAATGCGAGGTGCGTTCTTCGCGACAC
TCGTCCAGTGGCACCCCCAACAGCAGCGGAGCCGGCGCCCCCAACCCCCGACACAACTCC
GTGTCGTCCAAGAGCCGCTTCTCGTTCGCCCAGCAGTACCCCACCCCCAACGGAGGCGCT
GGAGGCGGACCGTCCTCGCTGGAAATGCCCATGCAGAACATGTCCGTCAACCACTCCACG
CCCTCCCACCACTCGTCCCAAGACTTTGGATACCCGCAGGAAGTCTTTTCGCCCACGTCT
CCGCGGTCCGTGTTCCCCGCCTCAGGCTCGGTGCCTGAGCTCGGTCTCCCCAGACCCATG
CTCGGCGCCTTGTCCTCCGGCAAGGCTGTGCTGCTCGAGAGCTCCAGGGATGACGACGAG
TACAACGACATGGTCAAGGGCCCCGTCAGCTGGTTTGCACGAGATCCCCAGCCTGGACAG
TCGCAGCAGCAGCAGTCTCAGCAGGGTGGCCAGCAGCAGCAACAGGCCCAGCAACAACAG
CAGCCCCAGCCACCCCAACAACCCCAACAATCGCATTCGGTCCCCTCGCAGTCGACTCCG
TCGTCGTCAGCGCCTTCCACGGCCCACTCGCCCATCTCTAAGCCCAAGTCGCCCGTGTCG
CAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGGACGACGATTCCAAGCGAGACGCC
TCCCGTGGCGACTCGTCTGGAGCGCCGGCTAACGCGCCTACGGGCCCTGCATCGCAGTGG
AGCGATAAGCGGCGTACATCGACGCTGCGGCAGTTCCAGAACGGCGGCAAGGCCGTCGCT
GCCACTACCCCCACCGCGCCGGCCAACTACGATGACTCGGCTGTTTCTTCGGGCGAGTCG
TCTCCCAGCGAGTCCACCATCTCGCTGTCGTCGGTGGTGCCCGTGCCCACCAACTCGGTG
GACGACCTGCCGCCCATCGACACGTCGGCTGGTCCGGGCGCCGCCTCCCGCATCGTGGTA
CCCTACTCACCGACCAACGCGTCCACCACCATCCAGGTGCTGCAGAACGGCGGCCGTGTG
CTTCCCCCTGCCAATCCTGCCGACCAGAACCCCCCTTGCAACACTCTGTACGTGGGCAAT
TTGCCTATGAACACGACCGAGGAGGAGCTGATGCAGCTCTTTTCCAAGCAAAAGGGCTAC
AAGCGGCTGTGTTTCCGCACCAAGATGAACGGGCCCATGTGTTTTGTGGAGTTTGAAAAC
GTCATGTATGCATCCAAGGCGCTTAACGAGTTGTACGGAAAGGGTCTCAAGTACAGTGTC
AAGGGCGGCATTCGGCTGTCGTTTTCCAAGAATCCGTTGGGCGTGCGGAGCAGTGGCGGC
AGCGGAGGGTCGTCGCAGCCTCCCGTGAACGGTGGCCGACAGGACAAGAGGGACTATAAT
GGTGACTACTACTACTAGTTAGGTAGAGTGAGCGTCACAGACACTTTTGAAGTGGTGTAT
TTGTATTGAGAGCATATAGCATAATAACATGAGTGAACATTGGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12375g_CDS-001

Protein length: 626 aa.
Product: Conserved hypothetical protein

>YALI0F12375g_CDS-001 MSFAFEGQPQHSPFFYEGQQHQHQHQHQHQHHAGPQHSSQQHPQGPHQVQQQQHVPPQHQ
GHQQHQQQQHAGPAPPGKVNLTQLPRDVTPRELRLLFAFAPDFLHCELHKLPFGDDSPIG
TAYFRTYTAAINCQVTLDGRTDLFGDDTYPLKCEVRSSRHSSSGTPNSSGAGAPNPRHNS
VSSKSRFSFAQQYPTPNGGAGGGPSSLEMPMQNMSVNHSTPSHHSSQDFGYPQEVFSPTS
PRSVFPASGSVPELGLPRPMLGALSSGKAVLLESSRDDDEYNDMVKGPVSWFARDPQPGQ
SQQQQSQQGGQQQQQAQQQQQPQPPQQPQQSHSVPSQSTPSSSAPSTAHSPISKPKSPVS
QQQQQQQQQQQQDDDSKRDASRGDSSGAPANAPTGPASQWSDKRRTSTLRQFQNGGKAVA
ATTPTAPANYDDSAVSSGESSPSESTISLSSVVPVPTNSVDDLPPIDTSAGPGAASRIVV
PYSPTNASTTIQVLQNGGRVLPPANPADQNPPCNTLYVGNLPMNTTEEELMQLFSKQKGY
KRLCFRTKMNGPMCFVEFENVMYASKALNELYGKGLKYSVKGGIRLSFSKNPLGVRSSGG
SGGSSQPPVNGGRQDKRDYNGDYYY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG