YALI0F11869g

Overview

Description similar to uniprot|P36123 Saccharomyces cerevisiae YKR028W (ohnolog of YJL098W) SAP190 Protein that forms a complex with the Sit4p protein phosphatase
Locus type CDS
Locus tag YALI0F11869g

Location

Species Yarrowia lipolytica Positions 1570585..1573268
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2684 (nuc.)
Previous locus YALI0F11847g Next locus YALI0F11891g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11869g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11869gYALI0F11869g_mRNA-001YALI0F11869g_CDS-001

Nucleotide sequence

 

>YALI0F11869g
ATGTCATTCTGGCGTATGGGATCCGGCTTTTCGTCGGTCAGTGTGATTGACAAGATTCTG
GACAACCCAGACCACACGTTGCACGAGCTTCTGGAGGAGCCCGACCTGCTCCAGGAGGTG
CTCAACTCCAACGCCAAGCTCACCGAGTATCTGCGACGAGACGATATTCTGGAGGAGCTG
GTTCAGCTGGTCAAGGGGTCTCCGGAGAGCTCAAAAGAGGAGGGTCAGGGCGAAGGTGAG
GGCGAGAACGAGGGCTTCGACGACAAGAAGCCCAATTCTGAGGAAGATAAGGACAAGAAG
GACGACTGTGATAACGACAATGACGTGGAAATGGCAGATTCGGACGACAAGGAGCAACCT
AAGGAGGAGGAGGAACCGAAGCAGGGAGAGCAAGCGACCGACGCAGCAGACCCCGACAAA
GACGACGAGGACTCGGACACGTCGTTCGATTCCACATCGTCAGACCCCTCCAAGTACAAG
CTCGAGGAGGAGGACCAGCAGCACTACGCGTCGGTGGCCTCTGAAATCCTGTCTGCCGAG
GTCTGGTCACTGACAGAGGCGCTCATGGAGCGGGAGGAGCTGGTGCAGCAGATCTGGGAG
ATCCTGGACTACCCGGCCCCGCTGTCCATGAACCAGGCACAGTTCTTCACGAAAATCTCG
GAGCATCTGCTGGACAAAAAAACAGACGATATGATTGCATTCATCAAGCGGCAGTCCAAC
TTTGTCGAGCGATTCATGCGCCACATTGACGACCCGCCACTCATGGACTTTCTGCTCAAG
GTCATTTCCACCGACAAGGCCGACAACTCCACGGGCATCATCGACTTCCTGCAGAAACAG
CGCCTGATCCCGTCGCTCATTGCCTTTCTAGGGCCCGACGTGCCGTCCTACATCCAGTCT
GCCGCGGGCGACTTTGTCAAAGCGTTTGTAACCATGTCGGCCAACTCAAACTCGGACAAC
TCCACTATTGGCCCCAACGAGCTGTCTAGAGAGCTTGTTTCAGAGCCTGTCGTGCGCGAG
TTTGTGCGACTCATGCTGTTTGGAGGCACCGGCCTTGCTACCGGCGTGGGCATCATCATT
GAGATCATCCGAAAGAATAACTCCGATTATGACTACATGCCTGTGTTGTTCATTACCATG
AAAACACACCCTCCGGGACCTCGAGACCCCATCTATCTCGGCACGCTGGTGCGCATCTTT
TCGCAGCACATTCCCGAGTTCCAGGCCATGCTCACCCGTCCCAGCAATAAGACGCTCAAG
ACCCCCATTGGCGACATTGAGCCACTGGGCTTTGAGCGGTTTAAGATCTGCGAGCTGGTG
GCAGAGTTGCTGCACTGTTCTAACATGACACTGCTCAATGATCCCAAGGGCGAGACCATT
GTTGCCGAGCGAGATGCCGAGCGAGAGCGAGTCAAACAGGTCATCGCCAAGGCAAACGAG
GACGGTGGCGACATTGACTTTGCCCGTCTTTCAGTGTCCAACGAGGACGAGGAGAACGAG
GAGCAAAACGAGGAGGAAGAAGGCGAGGCTGCCAAGGCTGACGCCGAAGAGGCCAAGGCT
GATTCAGCCGAAACCAAGGCCGAGTCCGAGGCAGTCGAAACCGAAGACAAGGACGACTCG
CTGGAGGCAATCGAGGCAGCCCTGCGCAAGGACCCCGTGGTGGGCGATCTGCTGAAAATC
TCACTGGTGGACAACGACGTCATTGTCACGATTCTCAACATGTTCATGAAGTTCCCTTGG
AACAACTTTCTGCATAACGTGGTGTTTGACATTGTGCAGCAGATTCTCAACGGCCCCATG
GGTGACGGCTTCAATCGGTTCCTGGCCATCAATCTGTTTGATAAGGGCCAGCTAACCCAG
CTCATTGTGGACGGCCAGCAGCGGTGCGACGAGTACGAGACCGAGCACGGTACCCGAATC
GGTTACATGGGCCACTTGACGCTCATTTCCGAGGAGGTGGTCAAGTTCACGGCGGTGTTT
ACCCCCGAGTCTATCTCTCCGGTGGTGGCTGCCGCCGTCACGGTCCCTGAGTGGATCATG
TACGTGGCCCACACGCTGGTCAAGACCCGGGAACAACACAATGCTCTGCTTGGCGGAGCT
CGGCCGGACCACAACTCTGTGGCGCACAATCCCGACGCCATTATTCTTGGCGACGGAGCT
GGCAACGAGCTCGGTGAAGAGGAGGCAGAGGACGACGAGCGAGATGGCGGAGTGGTGGAC
GTCGACGAGGACGCCAAGGAGGACAACCCCGACCAGTTTTCGCGATACATGAGTCAGCAG
ATCACTGGCGACATGCCCGACCGGTTCGGCTCATCCGACGAGGACGATGAGGACGACGTC
TGGGAGGAACGCAAGTTCTCCAACGATCTCAAACCGTTCCACACCTCGAACAAGAAGGAG
TCTTCGGACGAGGACTCCGATGTGTCTGAGGGTGAACCAGAGGTTGAGATTGAGCAGGAG
GTCGAGGTCGAGGGAGCTGACAAGGACGCAGCATTACGTTCGAGCAAGGAGGATAGCCAA
AAGTCTGACGGAGACGCAAATGAGGAACCTGAGAAATCGGAGGATGCATAAATAATGATG
TAATGAGATTGGAAGTTTTGACAGATCCGAGCTCAGGGAGGGTCTGTACATTGTAGAAGA
TCGATGACAGATCCGAGAACCGCGAGGGTCTGTACATTAGAAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11869g_CDS-001

Protein length: 857 aa.
Product: Protein that forms a complex with the Sit4p protein phosphatase, putative

>YALI0F11869g_CDS-001 MSFWRMGSGFSSVSVIDKILDNPDHTLHELLEEPDLLQEVLNSNAKLTEYLRRDDILEEL
VQLVKGSPESSKEEGQGEGEGENEGFDDKKPNSEEDKDKKDDCDNDNDVEMADSDDKEQP
KEEEEPKQGEQATDAADPDKDDEDSDTSFDSTSSDPSKYKLEEEDQQHYASVASEILSAE
VWSLTEALMEREELVQQIWEILDYPAPLSMNQAQFFTKISEHLLDKKTDDMIAFIKRQSN
FVERFMRHIDDPPLMDFLLKVISTDKADNSTGIIDFLQKQRLIPSLIAFLGPDVPSYIQS
AAGDFVKAFVTMSANSNSDNSTIGPNELSRELVSEPVVREFVRLMLFGGTGLATGVGIII
EIIRKNNSDYDYMPVLFITMKTHPPGPRDPIYLGTLVRIFSQHIPEFQAMLTRPSNKTLK
TPIGDIEPLGFERFKICELVAELLHCSNMTLLNDPKGETIVAERDAERERVKQVIAKANE
DGGDIDFARLSVSNEDEENEEQNEEEEGEAAKADAEEAKADSAETKAESEAVETEDKDDS
LEAIEAALRKDPVVGDLLKISLVDNDVIVTILNMFMKFPWNNFLHNVVFDIVQQILNGPM
GDGFNRFLAINLFDKGQLTQLIVDGQQRCDEYETEHGTRIGYMGHLTLISEEVVKFTAVF
TPESISPVVAAAVTVPEWIMYVAHTLVKTREQHNALLGGARPDHNSVAHNPDAIILGDGA
GNELGEEEAEDDERDGGVVDVDEDAKEDNPDQFSRYMSQQITGDMPDRFGSSDEDDEDDV
WEERKFSNDLKPFHTSNKKESSDEDSDVSEGEPEVEIEQEVEVEGADKDAALRSSKEDSQ
KSDGDANEEPEKSEDA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG