YALI0F11847g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F11847g

Location

Species Yarrowia lipolytica Positions 1566615..1568984
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2370 (nuc.)
Previous locus YALI0F11825g Next locus YALI0F11869g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11847g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11847gYALI0F11847g_mRNA-001YALI0F11847g_CDS-001

Nucleotide sequence

 

>YALI0F11847g
ATGGCCAAATCCGCAGACAAGGTGGAAAAGCCCTGGGAAACGGCCTCCGAGCCGCAATCG
TCCCAGACCGCCCAACGCAAGCGAAAACCCGCCGCAAAAACCACATGCTCCCCCTGCAGA
ACCACTCGACTGGCGCTGCGGGCGCTCTTCTGGTACGCCGTCTTCCTGCTCTACTGGAAG
TGCCCCTACGGCTCCGAGCTCAACACAAACAGCCCCGCGCTCTGTGGCCCGCTGCATTGC
GGTATCCAGCGAATTGAGCCCGTCGTCAAGCCCTACTATGACACCTACGCCGAGCCCTAC
GTGATGCTGGCCCGTCCCTATTGCACAAAAACCGTCGAGCTCAACAACAACTACGTGGTG
CCTGCTGGCCAGCGGGTCGGACGTGCGGCGCGAGCAGTGTACAACCGGTTCCTGGCTCCC
CACGTCGACACGGCTTGTGCAAAGGCCGAGGAGCTGTACGATACTCATGCCAAGGAGCAC
CATCAGGTTGTGACCCAGCACTACAACCATGTGATGCAATATGCCAATCAGCAGTACGAA
CGGGCGCGAATCATCAGCCTGACCGTCTACATGAATCACGTTCAGCCCGTGCTGGTCAAG
TTGGAACCCCATTGTGATCGAGCAGTCAGATATCTGCATTCGCACGTGTGTCCCCGAGCC
AAGGCATACTCGCTCCAGCTCTACTACCACATTGAGAGCGTCATTTCACGGGGCTACGCT
GTGATCACGCCCAAGATTCAGGAGGTTTGGGACAAGAACGTGGAGCCTCAGCTGGTCAAG
ATCCGAGAACGAGTCTCTCTGTACCGACACAAGAGCCAGACCATTGTTTCCACCGCCGGA
ACCGTGATCATTGGCGTCGAGAACCCTACCGATACCGCCGCCGAGGTGTCTTCTTCCGTT
TCTACCTCCGTTGACACCACCTCCGAGACTTCTGCTGCTGATACCCTTCTGGCCACTCCC
GTCGAAGAGCTGGAGGAGACTGCCACCGCTACGGAAGATGCTGACGAGGAGAAGATCACG
CCGTTCAAGTGGCCCGGAGCTCCCGAGGAAAAGGACCCCGCGGAGTCTGCCCTTCAGTAC
TGGAAGAAGAAGGTGACCAAGCAGCTCGAGGAGGCCCAGCTGTCTCTCAACGAGGAGGTC
AACGCCGAGAAGGCCCGTCTGCTGCGGCTGTTGGAGCCCCAGTTCACCGAGAAGCTGCAG
CATCTGTCTGACGTGGCCCAGAGCGCCTACATTACCATCGACAAGGTGGTGGCCGATATC
ATCCCCCACCGATTCCGCAAGGAGTTCAATGCTAAGTACGGCCCCGTTGCCGAGCGAAAA
AAGGCTGCCGAGGAGGAGGGCATTGAGGATGAGTACGATGAGGACATTGTTGGTACCCAG
ATCCGAGTAGAGCCCTCGGACGTTCAGGCCACCTTCAAGACTCAGGCTGATCTGTTACGA
GAAGGCGCCATGGACGTGCGTGAGCTCGCGTCTGAGCTCGCCCAGACTGTCATTGATCGA
ACCGAAAAAGTGCGGCTCAACACTCTGGAGGTGCTGGACGAGTTTGCCGAGTTTGCGCTC
AAGGAGCTAGCCAAGACGGTCGTCAACACCGAGTCCTTCTCGCACTGGAAGGAATACAAG
CAGGTCAAGGACTCGATCATCGACGCCAAGGAGCGGATGGAGAAGAGTGAAATCCCCATG
GAGGACGTCAACGGATACCTGCGGGAGGTGCAGGAGACCGCCAACCACCTTGCTCGAGAG
GCTGCCCAGGCGCTCAACGGCCTGCGGTCCAAGTCTGACTTTTACTTCCAGGAGCGGCAC
CGAATGGAGGATTCGGAGCGGGTGGCCAAGGGCGAGACTTTATCCGATGAGACTCCCGAG
GGAGTGGAGTTCTACGAGCCTACGGCGGAAGAGATTGCCGAGGAGGCAGCTGCCGAGAAG
AAGCAGCGGGCCAAGGCTCCGTTTGTGGAGTACGACATTGAAGAAGAGGAGGGGGAGGAG
GAGGAGGAGGGCTCGACGTCGACATACACCATGACTCAGACCCAGACTCGGGTGGTGACC
GTCAGCACGGACGAGAAGCCTGTTGCCACCCCCGAGCCTGAAGAGGAGGCCGAGGTTGAG
GAGGAGGTGGAGGACAAGACCGTCAAGAAGACGGCTTCTTCGTACGGCGACTTTGACGAG
GAGGATTACGAGGATGAGGAGGATGAGTATGATTACTAGGCCGATCCGTTGCAGCGTTTG
AGCGTTTGAGTATAGTCTTGGGCATTCACGGTACAATGATACCACAAGAGAAAAAATAAA
ACTAATACTAAGCTGAGTGTGAGTACTGGGGACAAGGAAGCACGAGTCCGTTTGGATGGA
CCCCTGGGTCCTCTTGGCGGGTCTGATTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11847g_CDS-001

Protein length: 733 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F11847g_CDS-001 MAKSADKVEKPWETASEPQSSQTAQRKRKPAAKTTCSPCRTTRLALRALFWYAVFLLYWK
CPYGSELNTNSPALCGPLHCGIQRIEPVVKPYYDTYAEPYVMLARPYCTKTVELNNNYVV
PAGQRVGRAARAVYNRFLAPHVDTACAKAEELYDTHAKEHHQVVTQHYNHVMQYANQQYE
RARIISLTVYMNHVQPVLVKLEPHCDRAVRYLHSHVCPRAKAYSLQLYYHIESVISRGYA
VITPKIQEVWDKNVEPQLVKIRERVSLYRHKSQTIVSTAGTVIIGVENPTDTAAEVSSSV
STSVDTTSETSAADTLLATPVEELEETATATEDADEEKITPFKWPGAPEEKDPAESALQY
WKKKVTKQLEEAQLSLNEEVNAEKARLLRLLEPQFTEKLQHLSDVAQSAYITIDKVVADI
IPHRFRKEFNAKYGPVAERKKAAEEEGIEDEYDEDIVGTQIRVEPSDVQATFKTQADLLR
EGAMDVRELASELAQTVIDRTEKVRLNTLEVLDEFAEFALKELAKTVVNTESFSHWKEYK
QVKDSIIDAKERMEKSEIPMEDVNGYLREVQETANHLAREAAQALNGLRSKSDFYFQERH
RMEDSERVAKGETLSDETPEGVEFYEPTAEEIAEEAAAEKKQRAKAPFVEYDIEEEEGEE
EEEGSTSTYTMTQTQTRVVTVSTDEKPVATPEPEEEAEVEEEVEDKTVKKTASSYGDFDE
EDYEDEEDEYDY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG