YALI0F11825g

Overview

Description weakly similar to uniprot|P36033 Saccharomyces cerevisiae YKL220c
Locus type CDS
Locus tag YALI0F11825g

Location

Species Yarrowia lipolytica Positions 1561490..1563806
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2317 (nuc.)
Previous locus YALI0F11803g Next locus YALI0F11847g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11825g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11825gYALI0F11825g_mRNA-001YALI0F11825g_CDS-001

Nucleotide sequence

 

>YALI0F11825g
ATGAAGTCGCCCAAGGATATGGAGGTCGAGACTCTGTCGCGACTTCTCAAGAGCTACACT
CTCTGGGGTGACTGCGAAGATCTCAAATGCGCGTGCAAGCAGGAGCTTTTCCCCGCCTCC
GTGGCCATCACCGTGGACGAAAACGTGCGGGACGAGTGGAAAGAAGAGATCTACGACAAG
TTCATTGTGTCCAAATGTAAGAAGGCCAAGGTCCTTTCTTACAGCAAGGCCCTGGCTGTG
ACTGAGTCGGACGAACCGCTCGACTCCACCAAGGCCAAGCCTAAAAAGCCCATCGAGCAC
CCCGTCGTCTTCATGCCCAAGGCCTACCAGCACATGTACAAGTCGTCCAAGGTGTCGATG
CAGAACAAGGACACGGGTCTATGGACCGGCGGCTTTCTGACAGGCTACTGGCTGTTTTTG
GCGTTTGGTTGTATGGTTCTCAACCTCTTCCGATGGTTCACCTGGAAGCGATCGGCCAAC
CGGTCTGTTTTGAAGCGTCCCAACGCTCTGGTTCGGGCCTACCAACGTCATATTGAAATG
CCCGCTCTCTACGGATTCAGACACATGCAGCGAATCAACTTCTACGGCATTGAAATGTCC
ATCCCTACCCGATGGGAAACAATTGTCATTTTCTTCTACTTTGCCTGCTCCGTCATTCTG
TTGGCAACCCGATACGAAGTGGTGCATCCCGAAAGTGCCCGGTTCGGCTCCCAGAGACAA
CAGCTGCTCAAGTACGTTGCCGACCGGGCGGGAATCCAGGTCACGGTCCAATTGCCCATG
CTCGTGCTGTTTGCGCTCAGAAACAACTTTCTCATGTGGTTGACGGGCTGGTCCTTCTCT
ACCTACCAGTGTTTCCATCGAGCGGTTGCCCGAGTGACCTATCTTCAGATCATTGTTCAC
GCCTCGTGTTACCACATGTTTGACGGCGCCAAAAGCGGCGGAATCCGGCCCAATCTATGG
GTAAAGGTCTACTTCAAGGGAGGCGTGGTTGCCGCCGTGGCCATGGCGTGTCTGATTCTG
TCGGGTCTGTTTCGACACAAGTGGTACGAGGCCTTTCTCTTTTTCCACATTGGAGCCGCC
ATTGTCGCTCTCTACTTCACCTACGACCATCTGTCCACTCTGGAGTACATGGAGCCCGTC
TATGTTGCCTTTGGCCTGTGGGCCGCCGACTGGCTCATTCGGGCACTGCGGGTGCTGTGG
ATTAACATCCGATGGTTCCGGTCCTCCAGCGTGTTTATGACCGAGGCCCAGATGTCGCTG
GTCGACTCCGACGTTGTCAAGATGGACATCAACACCCCCTGCCGATGGACTGTCAAGCCC
GGTCAGTACGTGTTCATCCACATTTTCCGAATGGGTCTGTTGGAGTCGCATCCCTTTTCA
GTCATGACCTCGGAGAACGGCTCGTTTCAGCTCATGGCCCGGGCTAGAGGTGGCATGACT
CGACGACTCACCAAGAGTATCGCCAAGGGCAACACCAACATGAAGATGCTGATTGACGGA
GTCTACGGCCACACCCAACCCGTGGATCTGTACGACAACGTTCTGCTGGTGGCTGGCGGC
ATTGGAATCACTGCCGTCATCCCCTACGCCGAAGATATCGTCGCCCGAAACATCCCCGCC
AAGGTCAAGCTCATGTGGACCGTGCGAGACATTACTCATCTGGAGCTCATGGCGGACCGG
CTGGAGAAGCTGGTGGAGGACGGACACGTGCAGCTCGAGCTCTACGTGTCGCAGACCCAC
GGAGACACTACCTATCTGTCGTCTCCAGTGGAGGAGAAGGGCTCTTTCAACGACAAGATT
GAGGAGGAGGAGTCCGATTCGGGTAACTCGCAGGAGGATCTGGGTAACGCCGAGGCCGAC
AAGGACGTGATGCGGGCCAAAAAGGACCACCATCTCCATCTGCATCAACACAACCCCGAC
CTGGCCGAAGAGGTGCTTGAGAAGGGCATTCAGCATCCCCCCAAGCAGGTGCCTGTGCCC
GGTTCTCAGGGCAAAATGCCTCTCTACGCATCTCTGGTCAACATGGGCAAACGACCCGTT
CTCACCGAGGTGGTCACCGCCACCTTCACCGAGGCTGAGGGCTCCGTGGCGGTTCTGGGC
TGCGGTCCGGCCACCATGGTCGACGCTCTGCGAGGAGTGGTTTCTGCCGAGATGGGTCTC
GTTATTAACGGCCGAGTGGACTATTACGAGGAGGCCTTTGGATGGTAAAGAGAGTGAGCT
CTGTTGGAGGCACTATATAGACGGTGTAGACAGATTGGTCTGACTGGTTCAGATCACAGT
AAAATTACGAGTTACGATGAATACATTAATTTATGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11825g_CDS-001

Protein length: 736 aa.
Product: Conserved hypothetical protein

>YALI0F11825g_CDS-001 MKSPKDMEVETLSRLLKSYTLWGDCEDLKCACKQELFPASVAITVDENVRDEWKEEIYDK
FIVSKCKKAKVLSYSKALAVTESDEPLDSTKAKPKKPIEHPVVFMPKAYQHMYKSSKVSM
QNKDTGLWTGGFLTGYWLFLAFGCMVLNLFRWFTWKRSANRSVLKRPNALVRAYQRHIEM
PALYGFRHMQRINFYGIEMSIPTRWETIVIFFYFACSVILLATRYEVVHPESARFGSQRQ
QLLKYVADRAGIQVTVQLPMLVLFALRNNFLMWLTGWSFSTYQCFHRAVARVTYLQIIVH
ASCYHMFDGAKSGGIRPNLWVKVYFKGGVVAAVAMACLILSGLFRHKWYEAFLFFHIGAA
IVALYFTYDHLSTLEYMEPVYVAFGLWAADWLIRALRVLWINIRWFRSSSVFMTEAQMSL
VDSDVVKMDINTPCRWTVKPGQYVFIHIFRMGLLESHPFSVMTSENGSFQLMARARGGMT
RRLTKSIAKGNTNMKMLIDGVYGHTQPVDLYDNVLLVAGGIGITAVIPYAEDIVARNIPA
KVKLMWTVRDITHLELMADRLEKLVEDGHVQLELYVSQTHGDTTYLSSPVEEKGSFNDKI
EEEESDSGNSQEDLGNAEADKDVMRAKKDHHLHLHQHNPDLAEEVLEKGIQHPPKQVPVP
GSQGKMPLYASLVNMGKRPVLTEVVTATFTEAEGSVAVLGCGPATMVDALRGVVSAEMGL
VINGRVDYYEEAFGW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG