YALI0F11473g

Overview

Description highly similar to uniprot|P39076 Saccharomyces cerevisiae YIL142w CCT2 chaperonin of the TCP1 ring complex
Locus type CDS
Locus tag YALI0F11473g

Location

Species Yarrowia lipolytica Positions 1516688..1518769
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2082 (nuc.)
Previous locus YALI0F11451r Next locus YALI0F11487g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11473g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11473gYALI0F11473g_mRNA-001YALI0F11473g_CDS-001

Nucleotide sequence

 

>YALI0F11473g
ATGGTGAGTATGAGAGGAGGTATGAGCCGGGAGAAATGCCGGTTGCAGCATCAATGTGGT
GATAATGGCGTGGGCGGCTTTGTGGGCTCCTCGTCGACCGTCTTGTTCGAGGTCGTGGCA
GTGTAACAGGCAATTGGCAGGCATCATCAATCAAGAGAGTCTTGGAGACGTGGTGACATC
GAGGGGTATTGCACCATCACAATGTCGTGGCCATACCGGTAGCAATGTCGGTACGTCCCC
GTGTTTGATGTGTCGTCGCAACATTGCTATGTGTTGTCATCACACCCTACCCACGCCATT
GTCTCACAGATCACGTCTGTCGCAACCCCCAAAAACACTTATCTAACCCCAGTCAGTACC
GATTTTTTCCGACCAGGTTGTTGAGGAGCGAGGCGAGAATGCCCGACTGTCTGCCTTTGT
GGGCGCCATTGCCGTTGGCGATCTAGTCAAGACCACTCTGGGCCCCAAGGGCATGGACAA
GCTGCTCCAGTCTGCCAGCAGCGGCAACTCGCTGGTGACCAACGATGGAGCCACGATTCT
GCAGCAGATTCCCTTTGACAACCCCGCCGCCAAGGTTCTTGTGAACATCTCCAAGGTCCA
GGACGATGAGGTTGGAGACGGCACCACTTCAGTGACCGTTCTTGCTGCCGAGCTGCTGCG
AGAGGCCGAGAAACTGGTTGATCTCAAGATCCACCCCCAGGTTATCATTGAGGGATTCCG
AATTGCCACCAAGGCTGCTCTTTCTGCTCTGGAGAAGAGCGCTGTCAACAACGGCGCCAA
CCCCGAGCTGTTCCGAAAGGACCTCGAGGCCATTGCCCGAACCACTCTTTCGTCCAAGGT
GCTTTCTGGCGACAAGGACTATTTTGCCAAGCTTGCGGTGGACGCTGTTCTGCGGCTCAA
GGGCTCCACCAACCTCGAACACATCCAGATCATCAAGAAGTTTGGCGGCCAGCTGCACGA
GAGTTATCTGGACGAGGGTTTCATTCTCAACAAGCGATTCGGCACTAACCAGCCGTCGAA
AATCACCAACTGCAAAATCATGATCGCCAACACACCCATGGACACAGACAAGGTCAAGGT
GTTTGGCGCCAAGTTCAAGGTGGACAGCACACAGAAGCTGGCCGAGCTGGAGAAGGCCGA
GAAGGACAAGATGCGCGCCAAGGTGGAGAAGATCAAGAACCACGGTATCACGTGTTTTGT
CAACCGACAGCTCATCTACAACTATCCCGAGGCTCTGTTCACCGAGGCCAAGGTCAACTC
CATTGAGCATGCCGACTTTGAGGGCGTTGAGCGACTGGCTCTGGTCACTGGCGGTGAGGT
GGTTTCCTCCTTTGAGCACCCCGAACTTGTCAAGCTCGGCTACTGCGATTCCATCGAGGA
GGTAACTGTGGGAGAAGATATCATGACCAAGTTCTCTGGTGTTGCTGCCGGAGAAGCCTG
CACCGTGGTTCTGAGAGGAGCAACCAACCAGATTCTCGACGAGGCTGAGCGATCGCTCCA
TGACGCTCTTGCTGTGCTTTCTCAGACCACTGCCGAGACCAGAACCACTTTGGGAGGCGG
CTGTGCCGAGATGGTCATGTCCCAGGCTGTGGAGCGAGCTGCCCAGAGCGTCGACGGTAA
GCAGTCGCTTGCCATCGAGGCGTTTGCCCGAGCTCTGCGTCAACTTCCTACCATTCTGGC
TGACAATGCCGGATTCGACTCGTCCGAGCTCGTGTCTAAACTCAAGTCTGCTATCTACAA
CGGCCTGCACACCTCCGGCCTGGATCTCAACAACGGCGTTGTCGCCGATATGCGGGATCT
CGGCATTGTGGAGTCGTACAAGCTCAAGCGAGCGGTGGTCTCGTCTGCCGCTGAGGCTGC
CGAGCTGCTGTTGCGGGTGGATAACATTATCAGAGCAAAGCCTCGAACTGCAGATAGACG
TCATTAATAGAGGGATCATTTTGCAAAAACGTGAGTGTATCGTACTGCGAAATAGTATAG
TATGGAAAGAGTGTGCAAGAGAAGAGATGAACTTGTAGTACTTGGAAGTAGCTCTTGATA
GTCTCAAAGGTTCAAGTACTTGATACATGTTGTTATGGACTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11473g_CDS-001

Protein length: 526 aa.
Product: Chaperonin of the ring complex, putative

>YALI0F11473g_CDS-001 MSVPIFSDQVVEERGENARLSAFVGAIAVGDLVKTTLGPKGMDKLLQSASSGNSLVTNDG
ATILQQIPFDNPAAKVLVNISKVQDDEVGDGTTSVTVLAAELLREAEKLVDLKIHPQVII
EGFRIATKAALSALEKSAVNNGANPELFRKDLEAIARTTLSSKVLSGDKDYFAKLAVDAV
LRLKGSTNLEHIQIIKKFGGQLHESYLDEGFILNKRFGTNQPSKITNCKIMIANTPMDTD
KVKVFGAKFKVDSTQKLAELEKAEKDKMRAKVEKIKNHGITCFVNRQLIYNYPEALFTEA
KVNSIEHADFEGVERLALVTGGEVVSSFEHPELVKLGYCDSIEEVTVGEDIMTKFSGVAA
GEACTVVLRGATNQILDEAERSLHDALAVLSQTTAETRTTLGGGCAEMVMSQAVERAAQS
VDGKQSLAIEAFARALRQLPTILADNAGFDSSELVSKLKSAIYNGLHTSGLDLNNGVVAD
MRDLGIVESYKLKRAVVSSAAEAAELLLRVDNIIRAKPRTADRRH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG