YALI0F11487g

Overview

Description weakly similar to uniprot|P32432 Saccharomyces cerevisiae YLR403w SFP1 zinc finger protein
Locus type CDS
Locus tag YALI0F11487g

Location

Species Yarrowia lipolytica Positions 1521612..1523707
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2096 (nuc.)
Previous locus YALI0F11473g Next locus YALI0F11498g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11487g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11487gYALI0F11487g_mRNA-001YALI0F11487g_CDS-001

Nucleotide sequence

 

>YALI0F11487g
ATGACCGCTACGCCAATAGACATTTCCTACCAGCAGAATTTCCATTCGCAACGATTCCGT
CGAGAATCCATGGCCCACTCGCAGGGCATGGGTGGAATTTCCTGGGGAGGAATGTCTGTT
GGCAGCTGGCTTAGAGACGAGTGAGTATGACCGACATGGATGGATTTGGATTGCCACCGT
GGCGATGACACCGACAGTGTGGTGATTGTGTGGTGGTGTGTGGTGATGGGTGGCAATGTT
ACACAAATGTGTGTGTGTGTGTGTGTGTGCGTGTGCGTGTGCTGTTATGTGTTTGTGACC
AGTGTTGGGGGTAGCGCGAGAGCAGATGTGTGTCCTCCGGGGCCCTAGACATGGCTGGGT
TGTCAAGTCGCAGTTGAGTGCTTTTAAATGAGAGCATCTTTTCTCGCTCTCTCTCACAGA
CTGCACCTTCTCGTCCATTCCATATCATAGGCACCTCACGCCGGCTAGGCTATGCACTGA
CTACGATAATGTGTGGTATGCTATGCCCTAAAGATGTGCACGTCCAGTTCGGCCCTGGAA
CTCCGACTCCGACCCCGACTCCGACTCCGACACCCACACCCACACCAACACAAACATGCC
GCAAGACATCGTAATCCCACAAACTCGCCCCTCACTTTTTTTTTGTCTGGTCGGTGTGCA
ATGTGCAATGTGCAATGTGCCCCATATTTCGCCCCTGAGGTGTTTCACCTTATGGTTGCT
GGACTGCCACATCACAATCACAAAAGCCATGGTGTGACCCACCGAACCAAGCCTCACAAA
GAGCTGGAGTGCTGCTTGTTACCGCAGAGCCTCTTTGAAGGTCTGAAGCTTGATGTCATC
CGTTGCTTCTCTCACCTTAGTCCCCATCTTGTACCCGTTGCGATCGAAGCTTGCGACTGC
ATAGAGTTCACGATCGGAAGGCGATAAGATGACGATATAACTAGAGAGGAGTCTCCAGAG
GTGCCGTCGACATCTCCAAGCAATACTAACCACAGAGTCATGACGCTAAACATGCCATCC
ACGACAACCATGGCCATGTCTCCAGGCATGGGCATCAACTCGTCGTCATACCTGCCCAAC
CTCGAGGCGCAGTACTGCAAGGACTACAGCTGCTGTGGCCAGACGTTGCCGACGCTGCAC
GACCTGCTGCGGCACTACGAGGAGTCGCACATTGCCCCATCGCCGCCCGTGGAGCAGCCT
CACATGGCCCGCAACACCAACAACGTTATGGAGGTGGTGTCGACCAACGACGTGTTCATG
AGCATGGGCGGTCCCGGAGGACCCCCCGGACAGCAGGGCGCCCAGGGCATGCAGCATCAC
CCCATGGCCCAAGGCCACCATCCCACGCATTTTCAGCAGCACCCACTGCCACCACAGGGC
CACGCACCCCAGGGTACGCAGATGCCTCACGGGCAGCACAACCCGCAGATGATGCAGATG
GGCCAACCACCGCAGCCCACGGGCACGTTTGACGAGGACGACGAAATGTGCATCGACGAC
CCGGCCCGCCATCTGTACGTGATGGAGCGGGGCGAGCACAAGCCGTTCAAGTGCCCGGTC
ATTGGGTGCGACAAGACGTACAAAAACCAGAATGGACTCAAGTACCATCGGATGCACGGC
CATCAAAACCAGATGCTGCATCTCAACGACGACGGCACCTACAGTATAATCGACCCACTG
TCCAACGCGCCGTATCCCAACGGCGTGGACATGGAAAAGGACAAGCCGTACCGGTGTGAG
ATTTGTGGCAAACGATACAAGAATCTTAACGGTCTAAAGTATCATCGTGGGCATTCCACT
CACTAACAAGCTGGACGTTGAGCTTTTTGAGCGTTTTGGGCGTTTGAGCATGTGTTTGTT
TGTGAGTGACAGTGACGGAGGTGTTATGTTTGGCATATGAGTGGTGAGGTGAGATCTTTG
GGCGCCCAATATACTGCATCTGGTGTCCAGCTCTCTACGAGTATTTGTATCTCCATGTGC
CCATTCGCCATGCGTCCATGCACCTCGGCCAGCTAGTCGCCTCGGATGTCAAGAGTATTT
ATCGGCCTTTTAGTTTCTGAGATGGTATTTATTAATAGAGTAGATTGAAAGAGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11487g_CDS-001

Protein length: 317 aa.
Product: Conserved hypothetical protein

>YALI0F11487g_CDS-001 MTATPIDISYQQNFHSQRFRRESMAHSQGMGGISWGGMSVGSWLRDEVMTLNMPSTTTMA
MSPGMGINSSSYLPNLEAQYCKDYSCCGQTLPTLHDLLRHYEESHIAPSPPVEQPHMARN
TNNVMEVVSTNDVFMSMGGPGGPPGQQGAQGMQHHPMAQGHHPTHFQQHPLPPQGHAPQG
TQMPHGQHNPQMMQMGQPPQPTGTFDEDDEMCIDDPARHLYVMERGEHKPFKCPVIGCDK
TYKNQNGLKYHRMHGHQNQMLHLNDDGTYSIIDPLSNAPYPNGVDMEKDKPYRCEICGKR
YKNLNGLKYHRGHSTH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG