YALI0F10945g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F10945g

Location

Species Yarrowia lipolytica Positions 1458369..1462287
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3919 (nuc.)
Previous locus YALI0F10923g Next locus YALI0F10967r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F10945g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F10945gYALI0F10945g_mRNA-001YALI0F10945g_CDS-001

Nucleotide sequence

 

>YALI0F10945g
ATGCAAGGTGGTGGTCCAATCAGCAGGACACAATTGGTAATTGAGTGGCTCGAAAAAGGG
CGGATGTTTTTGCGACATTCAGATTTGATCGTTTCAGTGAGATCAACAAGGCCAAACCAC
CTCTATATATACTGGCCAACGTTCTATACGGCCTCCAATCCCCCCTACACTTCATGTGAC
CAACCTTATGTTGAAAAATCACTGGCCTATCGAGAAAGGTTTAAAATATTGGATCATAAC
TATTACAGACAGCTAAGGACGCTTTTTTCGGTGAATATGCTGCGACTGGCAAAACTACAA
AGGGCGATACCGTCACGACCGGGTCTATCGCGGGCCGGCGCCGGGTATGTGGCTCTCCTA
CACGCCAATTACAGCTCTTCGACGATTCCCAAACTGTTTCCTCCAACACAGACAGAAAAG
AAGCCGACTAATCGACCCAAAAAGCGTGCGACAAAGCCAGGCAAGGGGAAGAAGGCAGAT
AAACCGCGCCAGGAAGAGGCAGCATCGTCGCCACAGCGGCCAAAACGCGCTGAAATGCCG
CGTTTGAGGCGATCTCCCCATACCCACCAGACAGATCAACTGGTGTCTAAACTCAAGGAA
ATGTCGAGTCAGAAGGAGGTCGCTCAGACGGTGACTCAGCGAGGCTCTCAATACATGGAA
ATGAGGCTTCCCGAGGGTATTTACAAACTGCTGGAGGCCACTTCGGGCATTTCGTACTCG
GTAGATGTTGCATGGGCAACTCAGGTGCTGCAGTTTGTGTCCAAGAGCAGAATCGACCCT
AGCACTGCGCGGGCCATATACAGACTACTGGAGCCACGTGTAACCGAGGTGGCCGCTGGA
GATGTGAACTCGTGGCGCCTGGCTCGGTACAATTCTCGATACGAGTACGTGAAGTCTCAG
GAGACGTTTTTGCGGGAGAAGGAACATGTGACCACCGTGGACGGATTGTCGGGCGAGCTG
GCGGAGCAGGCGATGGAAATTGATCCCAAGGGCGGCATGTACGGCATGCTACAGGAGTGC
ATGAACCTCGGAGTCGATGAACCCAGGAGAAACGCCGTGTTGTACACCATGCGAAGTTTT
CTGGGCATCAAACATGATGAGTGGACTGGAAGTGAAGATCCAATCAGGTGGGTGGCTTCT
GCGGATCACCACGATCAGCTGTACCTCTGGATGTGCGACAAGTACGGCAAAGAACAGGTT
CTCGACAGGCTGGTGGAGCTGATTGGAGAATGGAACAAGCAGGGAAAGCTGGACGCAAAG
AGCAACTTCAGCCACGTGGTTGTGCGCACACTCATAAAGGCCCTGATGGACAGAAGCCTG
CATACACATGCGGTAATGGTGAGTCAGAAGAATGAGCACTTGTTGATTTCTAACCCCGTG
CCGTTTCTACTCAGTCAGCACAAGCTGTACAACATGGCCGGTCCCATTTCTGTCGACAGG
CCTCAGTCGTTGGAGTATTTGTGTTCGGTTGTCGAAAAGTCTGCTACTGTCAAAAGTGGA
CGTCTTTTTGCTGCCGCCATCAAGGCCGCTGAAAACCACGCAAAAAGCAACACTGAGCTC
GTCTCATATCTCTGCGGTGTAGCGCTGTCTCGAACTCGGCAGCAGTACCAGGTAGCTCTT
CTTTTGGCGCTTGTGGAGCGTCATTCTCTGGAGATCCCTCCGAATTCGCTGCTGGATGCC
GCCTCCTACTGGACCAAACAGAACATTGACACTGCTCTGACGCTGTTCAAGGCCTTCTGT
AAAACTCCTTCTCGAACCGAGCATGCCCACTACTCCAAGTCGACGAAATGGAAACACGTG
ACGTTTGAACCGCTTTCCAACCTCATTAGCAGACTTACCAGCAAACACAAGGCGTGGGAG
AACCCCAAGCGCATCGGAGTTATATTTGAAGACATCAATTCGCTTCCCGAACATGCTCTC
AAGGCTCATTTCCCCGAGATTCTCAAATTGTACAGAAAAGTGGCTCATTCTGTGTCCCAG
GATTACGTCGGATACACTCTAGATGGCACAGATTTCAAAGTCATGACTGAAATGATGCTA
TTGACCCGGCTGAGCATCCATCTGCGACGCCAAATTGCTGCGGAAGACAAGCAGCTGTAT
TATCTGCGGAAAAAGACGGTTCTGGGACAGACAGACAAGGATCTGGAGAATGCCGAGTTC
TCTACTCGTCTCATGACTCAAATGCGGGTCAAGCTGGCTCGAAAACTGACTGCTCTGACC
AAGGAGATTGCCCGGAGACAAATGGTGGTGGATATTTCGCTGGCACAGGACATTTGCCGG
GTTCTCAACGACGGCTCGTTGTTTGCCTCTTCTCTCAGTGCCTGGAGAATGTACCTGTCT
CTGTCTGGTATTGTCCCTGCAGATGCCTATGCTGGAGACGGACGTCAGACGTATCTGTTT
GAGAGTCCCAATGCTGCAGATGTTGACTGCAGCTTTCTGGTTGAGGGCAACGAGGAACTG
TACAAGTCTCGACACGTTTCCATCTTTGAAAAACCTGCTGGAAGTCTCAACACCCTCAAA
ACTCTCGACAGTATTATCCTGATGATGAATGAGTTGACGCGAATTGGAGCAGAGTCCACT
GTCAAGGACGCCACTCACGCTAAACAGGGCAAGATTCTCAACGACTTATTTACTCGAGCA
TCTGATATGATTGAGAGCGTGCGAAACCCGTTGTTCAAATACAAGTACAACCAGCTCGCA
ACGGAGGCTTACATTCGAGCTGCTGCGCACTACAACCGTCCCGGAGGAGTCGTGGTGTTC
ACCAACATCAACTTTTCGTCCTGTGACGGAGCCACCTGGTCCGCCGTGCTGTCCTCTTGC
ATTGACGAGGACGTGACCATGGTGTACCGCAAGGCGTGTGAGCGCAAGTTGAGCAACCAA
GCCGAATTGCACGACGTCTTCATCCAGCGGAGCATCCAGCAGCAGGACTGGGACAATGTT
GGAACCGGTATTGAAAATCTGTTTGCTTATGGCAAGTTCCCCAACGAGAAGACCATGAAG
ATGATCCTGAAAAACTCGGGAGACATTGATATCTTTGATCTGCTAGTCGAGGTCACGAAG
GAGAGCATCCCCATCTACAACAAGGATACATCTCTGGAGATCCTGCAGGTGCTGACGTCG
CACACTACCAACCCTAATACCGCCGTGGACTACTACAAGAACCTCCGCGACTCTCTGGGC
TTTTCAGGTCTCGTTTGTCTCACGGAGCCTCTTTCTCGAGTCGATCCGTCCACTGCAACC
TCCATGGTCCCTAAACTTCTTGCTCTGGTTAACAGTGAGGTGCCCCTGGAGTATCTCACC
GAGCTCATGAAGTACGCTCCGGACCGGGTGTTTGAATTTGCATGCGAAACTCGGCAGAAG
AATACTCTGCAAGACATGTCTGTGGAGTCAGTAGAGGCGTTTGTGGTGGCGAGTCTCAAC
AGCGGCATCGCCCCTTATTTGGTGTTCCGGTTCCTCATGAACCTGAGATCCGTGGCCACC
TCTTGCATCTCCGTGTCGGCTCTAAAGACAGTGCTGCTGGAAATGGACCCCGAAGACGCC
AAGAAGGAGTACCGGGAGTTTGTCGAAGACATCTCCAGGGGAAACATTTGCATCGACAAG
CTGTGGGTCGCCAAGCACTTGCATCACGAGACGTACGGCTGCGATCTCCAGCCGTACTTT
GATCCCGCTCGTCTGGACGACATCTCCGCCAAGGGCGAGTATCTGATCCCCAACATTTTT
GACGGTCTCTACGCCGGTGCAGAGATCCCCTGCCATTCTGTGTTTTACAACTACACCACG
TTCGACAAGGACCTGCGAACTGAGGGAACTGGGGTGGAACTGAGCACCCGCTTCGACGGC
AAGCTCAAGGAGGAGTACACTAAAAAGTACACGGAAGCTTTCACTTGTAAATAGTAATTT
ATGCATTTCTTATGATAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F10945g_CDS-001

Protein length: 1298 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F10945g_CDS-001 MQGGGPISRTQLVIEWLEKGRMFLRHSDLIVSVRSTRPNHLYIYWPTFYTASNPPYTSCD
QPYVEKSLAYRERFKILDHNYYRQLRTLFSVNMLRLAKLQRAIPSRPGLSRAGAGYVALL
HANYSSSTIPKLFPPTQTEKKPTNRPKKRATKPGKGKKADKPRQEEAASSPQRPKRAEMP
RLRRSPHTHQTDQLVSKLKEMSSQKEVAQTVTQRGSQYMEMRLPEGIYKLLEATSGISYS
VDVAWATQVLQFVSKSRIDPSTARAIYRLLEPRVTEVAAGDVNSWRLARYNSRYEYVKSQ
ETFLREKEHVTTVDGLSGELAEQAMEIDPKGGMYGMLQECMNLGVDEPRRNAVLYTMRSF
LGIKHDEWTGSEDPIRWVASADHHDQLYLWMCDKYGKEQVLDRLVELIGEWNKQGKLDAK
SNFSHVVVRTLIKALMDRSLHTHAVMVSQKNEHLLISNPVPFLLSQHKLYNMAGPISVDR
PQSLEYLCSVVEKSATVKSGRLFAAAIKAAENHAKSNTELVSYLCGVALSRTRQQYQVAL
LLALVERHSLEIPPNSLLDAASYWTKQNIDTALTLFKAFCKTPSRTEHAHYSKSTKWKHV
TFEPLSNLISRLTSKHKAWENPKRIGVIFEDINSLPEHALKAHFPEILKLYRKVAHSVSQ
DYVGYTLDGTDFKVMTEMMLLTRLSIHLRRQIAAEDKQLYYLRKKTVLGQTDKDLENAEF
STRLMTQMRVKLARKLTALTKEIARRQMVVDISLAQDICRVLNDGSLFASSLSAWRMYLS
LSGIVPADAYAGDGRQTYLFESPNAADVDCSFLVEGNEELYKSRHVSIFEKPAGSLNTLK
TLDSIILMMNELTRIGAESTVKDATHAKQGKILNDLFTRASDMIESVRNPLFKYKYNQLA
TEAYIRAAAHYNRPGGVVVFTNINFSSCDGATWSAVLSSCIDEDVTMVYRKACERKLSNQ
AELHDVFIQRSIQQQDWDNVGTGIENLFAYGKFPNEKTMKMILKNSGDIDIFDLLVEVTK
ESIPIYNKDTSLEILQVLTSHTTNPNTAVDYYKNLRDSLGFSGLVCLTEPLSRVDPSTAT
SMVPKLLALVNSEVPLEYLTELMKYAPDRVFEFACETRQKNTLQDMSVESVEAFVVASLN
SGIAPYLVFRFLMNLRSVATSCISVSALKTVLLEMDPEDAKKEYREFVEDISRGNICIDK
LWVAKHLHHETYGCDLQPYFDPARLDDISAKGEYLIPNIFDGLYAGAEIPCHSVFYNYTT
FDKDLRTEGTGVELSTRFDGKLKEEYTKKYTEAFTCK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG