YALI0F10923g

Overview

Description similar to uniprot|P42826 Saccharomyces cerevisiae YGR194c XKS1 xylulokinase
Locus type CDS
Locus tag YALI0F10923g

Location

Species Yarrowia lipolytica Positions 1456389..1458081
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1693 (nuc.)
Previous locus YALI0F10901g Next locus YALI0F10945g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F10923g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F10923gYALI0F10923g_mRNA-001YALI0F10923g_CDS-001

Nucleotide sequence

 

>YALI0F10923g
ATGTATCTCGGACTGGATCTTTCGACTCAACAGCTCAAGGGCATCATTCTGGACACAAAA
ACGCTGGACACGGTCACACAAGTCCATGTGGACTTTGAGGACGACTTGCCGCAGTTCAAC
ACCGAAAAGGGCGTCTTTCACAGCTCTACAGTGGCCGGAGAAATCAATGCTCCTGTGGCA
ATGTGGGGGGCAGCTGTGGACTTGCTGATAGAGCGTCTGTCAAAGGAAATAGACCTTTCC
ACGATCAAGTTTGTGTCGGGCTCGTGCCAGCAACACGGCTCTGTTTATCTCAACAGCAGC
TACAAGGAGGGCCTGGGTTCTCTGGACAAACACAAAGACTTGTCTACAGGAGTGTCATCC
TTACTGGCGCTCGAAGTCAGCCCCAATTGGCAGGATGCAAGCACGGAGAAGGAGTGTGCG
CAGTTTGAGGCTGCAGTCGGCGGTCCCGAGCAGCTGGCTGAGATCACTGGCTCTCGAGCA
CATACTCGTTTCACCGGGCCCCAGATTCTCAAGGTCAAGGAACGCAACCCCAAGGTATTC
AAGGCCACGTCACGGGTCCAGCTCATATCCAACTTTCTAGCATCTCTGTTTGCCGGCAAG
GCGTGCCCCTTTGATCTTGCTGACGCCTGTGGAATGAATCTGTGGGACATCCAGAATGGC
CAGTGGTGCAAGAAACTCACAGATCTCATCACCGATGACACCCACTCGGTCGAGTCCCTC
CTTGGAGACGTGGAAACAGACCCCAAGGCTCTACTGGGCAAAATCTCGCCCTATTTCGTC
TCCAAGGGCTTCTCTCCCTCTTGTCAGGTGGCACAGTTCACAGGCGACAACCCAGGCACT
ATGCTGGCTCTCCCCTTACAGGCCAATGACGTGATTGTGTCTTTGGGAACATCTACGACC
GCCCTCGTCGTAACAAACAAGTACATGCCCGACCCCGGATACCATGTGTTCAACCACCCC
ATGGAGGGATACATGGGCATGCTGTGCTACTGCAACGGAGGTCTAGCACGAGAGAAGATC
CGAGACGAGCTTGGAGGCTGGGACGAGTTTAATGAGGCGGCCGAGACCACCAACACAGTG
TCTGCTGACGATGTCCATGTTGGCATCTACTTTCCACTACGAGAAATCCTTCCTCGAGCA
GGTCCCTTTGAACGACGTTTCATCTACAACAGACAAAGTGAACAGCTTACAGAGATGGCT
TCTCCAGAGGACTCACTGGCAACCGAACACAAACCGCAGGCTCAAAATCTCAAGGACACG
TGGCCGCCACAAATGGACGCCACTGCCATCATTCAAAGCCAGGCCCTCAGTATCAAAATG
AGACTCCAACGCATGATGCATGGCGATATTGGAAAGGTGTATTTTGTGGGAGGCGCCTCG
GTCAACACTGCTATCTGCAGCGTAATGTCTGCCATCTTAAAACCAACAAAGGGCGCTTGG
AGATGTGGTCTGGAAATGGCAAACGCTTGTGCCATTGGAAGTGCCCATCACGCCTGGCTT
TGCGACCCCAACAAGACAGGCCAGGTACAGGTTCACGAAGAAGAGGTCAAATACAAGAAT
GTGGACACAGACGTGCTACTCAAGGCGTTCAAGCTGGCCGAAAACGCCTGCCTGGAGAAA
TAACTAACTACCACACCAACACATATGAAATAGATGGAAATTACATACATAGGTAAACTA
AACCAGCATGGCC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F10923g_CDS-001

Protein length: 541 aa.
Product: Xylulokinase, putative

>YALI0F10923g_CDS-001 MYLGLDLSTQQLKGIILDTKTLDTVTQVHVDFEDDLPQFNTEKGVFHSSTVAGEINAPVA
MWGAAVDLLIERLSKEIDLSTIKFVSGSCQQHGSVYLNSSYKEGLGSLDKHKDLSTGVSS
LLALEVSPNWQDASTEKECAQFEAAVGGPEQLAEITGSRAHTRFTGPQILKVKERNPKVF
KATSRVQLISNFLASLFAGKACPFDLADACGMNLWDIQNGQWCKKLTDLITDDTHSVESL
LGDVETDPKALLGKISPYFVSKGFSPSCQVAQFTGDNPGTMLALPLQANDVIVSLGTSTT
ALVVTNKYMPDPGYHVFNHPMEGYMGMLCYCNGGLAREKIRDELGGWDEFNEAAETTNTV
SADDVHVGIYFPLREILPRAGPFERRFIYNRQSEQLTEMASPEDSLATEHKPQAQNLKDT
WPPQMDATAIIQSQALSIKMRLQRMMHGDIGKVYFVGGASVNTAICSVMSAILKPTKGAW
RCGLEMANACAIGSAHHAWLCDPNKTGQVQVHEEEVKYKNVDTDVLLKAFKLAENACLEK
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG