YALI0F10541g

Overview

Description similar to uniprot|P41910 Saccharomyces cerevisiae YDR005c MAF1 required for sorting of MOD5P
Locus type CDS
Locus tag YALI0F10541g

Location

Species Yarrowia lipolytica Positions 1421083..1422616
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1534 (nuc.)
Previous locus YALI0F10527g Next locus YALI0F10549g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F10541g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F10541gYALI0F10541g_mRNA-001YALI0F10541g_CDS-001

Nucleotide sequence

 

>YALI0F10541g
ATGAAGGTAAGTGGTTGGAGACGGTACAGAGATTGTGTTCGATAAGCTGTTTGGCGAGGT
CGGACGTCTTGGGGACGAAATGGGATACCGAGGGGGGTTTGTGGCGATTGATTTTTGCCC
TTCAATCAGTCGAGGTTGGCGATGAAGGGGTGTTTCTTGAATGTTTATCCCTCAGACACC
GGCTAACACGCGACGAAAATCACTCAGCGCGTGTTACCGGGGTGGTGTGGTGATAAGAAG
AGGTTTCAGGATGTGCAAGTCGATTTTAGCAGACAGAGTTGTCGATACACACGAGGATAG
ACACACAGAGACATACAGAGAGGCACACAGAAAGGCGCACACAGCGACACACACAGAGAA
ACACGCAGAGGGTACACGCAAACATACCGTGCTCTCGACAAGCGACACAGACACAAGCCC
AACCACAAACCCAGATGCGCATCTTAGTCTCTCTATCTGTGCCGTGATTGCTCTTCCCCC
ATCTCACAACCCATCAACTCACACTAACCCAGTTCATACAAGATCACACACTCGACGAGG
TGGCATCAGCACTCAAATTCGACACACCCGAATGCCACGTTTCCGGCAACATTGACCTGT
ACACCACCAAACCCGCTTCCTCGGACAAGAAGCTGTACAAGGTGCTCGACAAGCAGCTGT
CGTACCATCAAGACGCGCTCGACTCATTCACCTCCATCTCCACCCTCGGCACATCTTTCT
CTCCCCCACAAGTGCTCACCTTTGACAACTACTACCAATACGGCAAATCGTTGGACAGCA
GCGTCAGCAAGATGAGCAATCGAAGCCCCAAGGGCGTGAGCAAAGTGCCCAAGCAAAGAA
CCTATTCTTCCTCGAGAGCAGGCGTCTCTGTCGGCTCGCTATCGCCTCTACTCTCCTCTC
CCTTTGGAGATATGAGCGAAACTGCCAGTAGGAAGGTGTTTGCTTATCTGATTGCGATTC
TCAATGCGTCAGACCCTAATCACGACTTTTCCGTGCTACAGCCGGACGACTTTCAGCGCG
AGCCGAGCGCATCGGCCGTGATTTCGTCCTTCAACAACGTGCTGTTCGGCCTGGGTATGC
CGATCCCGCCCCGGATGTGGGACGTACTGGACAAGAGCATCGAGATGCACAACTGCACAA
TCTTTTCCTTCACGCCCGACGCCACGATTCTCGCCGACGAGCCTGGCGCCCTGTGGGCAT
TAAGCTGGTTCTTTTTCAATAAGAGAATGAAGCGAGTCGCATGTATTTCTCTCAACGCAA
GGAGGCATTCTCTGTCGCCTACGCTGGGGCCCAAGATTATGAGGTCCGATGTGATCAACG
GTGACGACGAAGAAGATTATGATCTCACGTATTCTTCCGACACTGACATGTACGACGAGA
TTGTCGGAGAACTTGATCTGGAGTAGTCCAGAGCACATTTTTATTTAACACAGCAGCACT
CGGCCGAGAACACCACTCAGTTTAACAGTTCAACAATGTTCGAGCCTATGACGTTTGATT
TTTCAACATATGAGTAATAAATGTATACCAGGTA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F10541g_CDS-001

Protein length: 300 aa.
Product: Negative regulator of RNA polymerase III, putative

>YALI0F10541g_CDS-001 MKFIQDHTLDEVASALKFDTPECHVSGNIDLYTTKPASSDKKLYKVLDKQLSYHQDALDS
FTSISTLGTSFSPPQVLTFDNYYQYGKSLDSSVSKMSNRSPKGVSKVPKQRTYSSSRAGV
SVGSLSPLLSSPFGDMSETASRKVFAYLIAILNASDPNHDFSVLQPDDFQREPSASAVIS
SFNNVLFGLGMPIPPRMWDVLDKSIEMHNCTIFSFTPDATILADEPGALWALSWFFFNKR
MKRVACISLNARRHSLSPTLGPKIMRSDVINGDDEEDYDLTYSSDTDMYDEIVGELDLE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG