YALI0F10549g

Overview

Description weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
Locus type CDS
Locus tag YALI0F10549g

Location

Species Yarrowia lipolytica Positions 1423688..1425075
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1388 (nuc.)
Previous locus YALI0F10541g Next locus YALI0F10560t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F10549g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F10549gYALI0F10549g_mRNA-001YALI0F10549g_CDS-001

Nucleotide sequence

 

>YALI0F10549g
ATGAAGTTCTCCATCCTCGCTCTCACTACTCTCCTGGCTGCGGTGTCTGCTGGCAAAGTC
ATCCAACTAGACTTTGTTCGAACCACCAGCTCCAGCCCCATCCGACAGAAGAAGATCACT
CTGCCCAAGGGTCTCAAGGTCGACCTGGCCATTCCTGTGGAAAATGATCTTGTTCTGTAT
TCTGCAAAGGTCCAGGTGGGTTCTCCTGAACAGGAGTTTGTGGTGCAGGTAGATACCGGT
TCTTCTGATCTGTGGCTCTACGACTCGTCTGATCTGTGCATTGGCGGAGGCTGTAAGCAG
TATGGACTGTTCAACACCAACGCCTCTTCTACTTTCAAAGATATTCTCCCAGGAAAGTTT
GGCATCAGCTATGGCGACGGCTCTTACGCCAAGGGCGACTGGGCAGAAGACACCGTCACT
ATCCAGGGAGTCAAGATCCCCAAGCAGCAATTTGGCCTAGCCAAGAATACCACTGCCACT
CCTGCCATTCTGGGAATCGGACTGACCGGTCTGGAGGCTGCGGAAAAGGAGTACAACAAC
GTGCCCAAGAGTCTGTATCTCAATGGAGACATCGGCTCGTACACTTATTCTCTCTATCTG
GACGATCTTGAGGCCACCCAGGGCAGTATTCTGTTTGGTGGTATCGACAAGAGTCACTTT
TCCGGTCCTCTCAAGACTGTCCCTCTGATTTCCTCCTACGCCTTCTGGGTGACTCTGTCA
AGGCTGGATATCAAGAGCGAAACCAGAAACAAGACCGTCAACGCGCTAGACGTGCCCGGT
CAGGTACTTCTCGACAGTGGAACTACTCTCACATACCTGCCTACCATCTCCTACGAGACC
ATTCTACAGGACTGGGGGATTGACATTGACCCCGACTACGGAGCCATTGTTCCGGAATAC
AAGCTGCAGAAGCTACAGGACGAGTATCTCGAGTACAATTTGCAGGGAGCAAAGATCAAG
GTCTCGGCTGCTCAACTGTTCGCCCCGGCATACACTGGAGATGACCTCAACACGGTAGCT
ATTTACCCCAACGGCCAGAAGGCTTATGGATTCCTTGTTGCTCCTAACGGTAACTCCACC
GAAGGCCTCATTCTGGGCGACTCTTTCCTGCGATCTGCCTACGTGGTTTACGACCTGCCC
AACCTTCAAATCTCTCTTGCTCAAGCCGATTACTCCGGCGGAGCTCCTCAAATCGAGCCC
ATTGACCCGGGTCTCAACGCCGTGCCTGGTGCTACTCCCGTGAGAGACTGGGGGGCCGTC
TACAGCAATGTTCCCATATCCACCTCCGTCAACTACACCCCCACCACCTATACTCTTTCT
CCCCGGCCATACAACGGTTCTTCTACCGACTGACCGGCTATATACTCATTTATTTAATGA
TTTCCATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F10549g_CDS-001

Protein length: 451 aa.
Product: Conserved hypothetical protein

>YALI0F10549g_CDS-001 MKFSILALTTLLAAVSAGKVIQLDFVRTTSSSPIRQKKITLPKGLKVDLAIPVENDLVLY
SAKVQVGSPEQEFVVQVDTGSSDLWLYDSSDLCIGGGCKQYGLFNTNASSTFKDILPGKF
GISYGDGSYAKGDWAEDTVTIQGVKIPKQQFGLAKNTTATPAILGIGLTGLEAAEKEYNN
VPKSLYLNGDIGSYTYSLYLDDLEATQGSILFGGIDKSHFSGPLKTVPLISSYAFWVTLS
RLDIKSETRNKTVNALDVPGQVLLDSGTTLTYLPTISYETILQDWGIDIDPDYGAIVPEY
KLQKLQDEYLEYNLQGAKIKVSAAQLFAPAYTGDDLNTVAIYPNGQKAYGFLVAPNGNST
EGLILGDSFLRSAYVVYDLPNLQISLAQADYSGGAPQIEPIDPGLNAVPGATPVRDWGAV
YSNVPISTSVNYTPTTYTLSPRPYNGSSTD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG