YALI0F09944g

Overview

Description highly similar to uniprot|Q6CB79 Yarrowia lipolytica YALI0C21252g
Locus type CDS
Locus tag YALI0F09944g

Location

Species Yarrowia lipolytica Positions 1346894..1347433
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 540 (nuc.)
Previous locus YALI0F09900r Next locus YALI0F09966g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09944g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09944gYALI0F09944g_mRNA-001YALI0F09944g_CDS-001

Nucleotide sequence

 

>YALI0F09944g
ATGCTTTTCAAGTCTCTTGCCATTCTCACTGCCGCCACCGCCGCCATTGCAGCCCCCGTT
GCTTGCGGTGAGCAGCCCGCCTCCAACGACCAGAAGGATAACCACAATGACACCCCCAAG
TACGTCCTTAACCTGTTTCCTGGAGCCGGCGTCACCGGCATGAAGCCCCTTCAGGTCCGA
GGAGAAAACATTGTCTGGGGCCTGACCCAGGGCTACTCCAACTTTACCGTTGACTCCATC
GGCGACGCTCTTGCCAACGTCATTTCTGACGGCCAGCCTCCCAAGGAACTTTACGTTGCC
GACAATGGTCAGCTTGTCGTCAACGAGCATCCAGCCGAGACCGGTAAGGGCTACAACGGT
GGCTGGGGCTTCTCCGGTGACGGCTCCGTCAAAGAGTTCTCTTCTTACGGCACTAAGGAG
TTCTACTCTTGCGTTTCCAACGACGACCCTCTTCACGGAGGAAACGATGTCTACGTTTTC
AACGGCAAGTACGCCTGTGACAAGCCCAACAAGTTCACCATTGGCGCAACCAAGGAGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F09944g_CDS-001

Protein length: 180 aa.
Product: Hypothetical protein of a 11-member gene family, conserved in the Yarrowia clade

>YALI0F09944g_CDS-001 MLFKSLAILTAATAAIAAPVACGEQPASNDQKDNHNDTPKYVLNLFPGAGVTGMKPLQVR
GENIVWGLTQGYSNFTVDSIGDALANVISDGQPPKELYVADNGQLVVNEHPAETGKGYNG
GWGFSGDGSVKEFSSYGTKEFYSCVSNDDPLHGGNDVYVFNGKYACDKPNKFTIGATKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG