YALI0F09966g

Overview

Description similar to uniprot|P40054 Saccharomyces cerevisiae YER081W (ohnolog of YIL074C) SER3 3-phosphoglycerate dehydrogenase
Locus type CDS
Locus tag YALI0F09966g

Location

Species Yarrowia lipolytica Positions 1348675..1350308
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1634 (nuc.)
Previous locus YALI0F09944g Next locus YALI0F09988g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09966g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09966gYALI0F09966g_mRNA-001YALI0F09966g_CDS-001

Nucleotide sequence

 

>YALI0F09966g
ATGAAATGGATGCGTCATAGTTCAGACAAAATTTCGAACCTAAAACGGCCCACAGATAAA
ACGGTGCATTGTCGCACATACGAACAGACCAGTCGTCGTTACATCGCCAACAACCCCCGC
CACACCATGTCCGCCGTCAACATTCCCGTGAACGAAAACGAGGTTTCGGTCTCGTCTTCG
CCCATCACGTCGTACGGATCGCCCGTCTCGGGCTCGTTCCAGGGCAAGCCCCGACAGCGA
CGATACTCTTACACCGCTGCGCGAACCAACAAGCTGAAGCCGTTTTCCACCGGCGACATC
AAGATCCTGCTGCTGGAAAACGTCAACCAGACAGCCATTGACATTCTCGAGGGCCAGGGC
TACCAGGTGGAGACCCACAAGTCGTCGCTGGACGAGGAGGAGCTGATTGAGAAGATCCGA
GATGTGCAGGTGGTTGGTATCCGATCCAAGACCAAGCTCAACTCACGGGTGCTCAAGGAG
GCCAAGAACCTCATTGCCATTGGTTGTTTCTGCATCGGTACCAACCAGGTCGATCTCGAG
TACGCCGCCAACAACGGTATTGCCGTGTTCAACTCGCCTTTCTCCAACTCGCGGTCTGTG
GCCGAGCTGGTCATCTGCGAGATCATCATGCTGTCGCGACAGCTGGGCGACCGAAACATC
GAGATGCACGCCGGCACCTGGAACAAGGTCTCCGCCAAGTGCTGGGAGATCCGAGGCAAG
ACTCTCGGAATTGTGGGCTACGGCCACATTGGCTCCCAGCTGTCCGTTCTCGCCGAGTCC
ATGGGCATGAACGTCATTTACTACGACGTGATCATGATCATGGGTCTCGGTACCGCCAAG
CAGGTGCCCACCCTTGCCGAGCTGCTGGCCCAGGCCGACTACGTCTCTCTGCACGTGCCC
GAGCTGCCCGAGACCATGAACCTCATGTCCAAGGCCCAGTTCGACGGCATGAAGAACGGC
TCGTACCTCATCAACAACGCCCGAGGCAAGGTCATTGACATTCCCGAGCTCATCTCTGCC
ATGAAGTCCGGAAAGCTTGCTGGAGCCGCCGTCGACGTCTTCCCCAAGGAGCCTGCCAAG
AACGGCTCAAACGAGTTTGGCTCCCACCTCAACGAGTGGACCAATGAGCTCCTCACCCTG
CCCAACCTCATCATGTCTCCCCATATTGGAGGCTCCACCGAGGAGGCCCAGTCCGCCATT
GGTATCGAGGTCGGCACCGCTCTCACCAAGTACATCAACGAGGGTTCCTCTGTTGGTGCC
GTCAACTTCCCCGAGGTCAACCTCAACGTGGTCAACCACGCCGAGGAGCACGACCACGTG
CGAATCCTGTACGTGCATAAGAACGTGCCTGGTGTGCTTCTGTCCGTCAACGAGATTTTC
GCCTCCCATAACATTGAGAAGCAGTACTCTGAGTCGCGTGGTGATATTGCCTACCTGATG
GCCGACATTGCTGACGTCGATCAGGCCGACATCAAGACTCTGTACGAGAAGCTCGAGCAG
ACCCCCTTCAAGATCTCCACCCGACTGTTGTATTAAGTGGTGAGGAGAGACCAATATGCT
AAGACAAGACAAACAAGAGATTCAACTAATTTTATAGATGTAAATACATTCAACCGTGGT
TAACGACAATGCTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F09966g_CDS-001

Protein length: 512 aa.
Product: 3-phosphoglycerate dehydrogenase, putative

>YALI0F09966g_CDS-001 MKWMRHSSDKISNLKRPTDKTVHCRTYEQTSRRYIANNPRHTMSAVNIPVNENEVSVSSS
PITSYGSPVSGSFQGKPRQRRYSYTAARTNKLKPFSTGDIKILLLENVNQTAIDILEGQG
YQVETHKSSLDEEELIEKIRDVQVVGIRSKTKLNSRVLKEAKNLIAIGCFCIGTNQVDLE
YAANNGIAVFNSPFSNSRSVAELVICEIIMLSRQLGDRNIEMHAGTWNKVSAKCWEIRGK
TLGIVGYGHIGSQLSVLAESMGMNVIYYDVIMIMGLGTAKQVPTLAELLAQADYVSLHVP
ELPETMNLMSKAQFDGMKNGSYLINNARGKVIDIPELISAMKSGKLAGAAVDVFPKEPAK
NGSNEFGSHLNEWTNELLTLPNLIMSPHIGGSTEEAQSAIGIEVGTALTKYINEGSSVGA
VNFPEVNLNVVNHAEEHDHVRILYVHKNVPGVLLSVNEIFASHNIEKQYSESRGDIAYLM
ADIADVDQADIKTLYEKLEQTPFKISTRLLY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG